Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1349 ATGTTCATGGAAGGATGTGACTTCCAAGGAACTCGCAGCGTCAAGAGACGAAGAAGAGAGCATGGAGTAGCAGTACTTAACTGTGATGATAATCTGGATCAGAAGAGACAGCAAGTTGAACAAAATTCTACAACCCATACCGTGAAGAGAAGTTCGAGATTCCAAGGTGTCAGCAGACACAAATGGACTGGTCGGTATGAGGCTCACCTATGGGACAAGCTCTCTTGGAATTTAACACAGAAGAAGAAAGGGGAGCAAGTTTACCTTGAATCTGCAGCCAGAGCATATGATTTAGCTGCACTGAAATACTGGGGAACATCAACTTTCACCAATTTTCGGATATCAGATTACATGAAAGAAATAGAGATAATGCAGACTATGACAAAAGAGGGGTATTTGGCCACTTTAAGAAGAAAGAGTAGTGGCTTTTCAAGAGGCGTGTCAAAGTACAGGGGTGTTGCAAGGCACCACCATAATGGTAGATGGGAAGCAAGGATAGGGAGGGTTTTTGGAAACAAATATCTCTACCTTGGCACTTATAGCACCCAGGAGGAAGCTGCTCGTGCTTATGACATCGCGGCCATTGAGTACAGGGGGATTCATGCTGTAACCAACTTTGATTTGAGCAATTACGTAACACTGTTAAGACCTGCCAGAGGAAATATCCAAGAACCAACGCTTGAATCACAGATCATACCAGAGGTTCAGACAGTGGCATCTCCATCCAATTATAATTCAATAGAGGAGGCCAAAACCTTGGCCCTTGACAGCAATTTGTTCTACACAGATTACCTGAGGTCTTCACAAAAGCAAGAGGTTGTTGAGAAGGAAATTGTTTTTATCTCAAGCAATAAGTCATCTTCCCCTACTGCTCTTGGCCTTCTTCTCCGTTCTTCAATTTTCAGGGAATTAGTGGAAAAGAATTTGAATATATCTGGAGATGAAGTTGATGGGGAAGACGCAAAGGATCGACAACCACATCTATCTGGTGATGATGAATTGAGTAGAATATTCTATGATAGTATTGGTGATATCCCATTTGCCAATGATACTAAAAGATACAATTTTGCAAGAGAGCTCCACTCCATTTTATGA 1095 0.4201 MFMEGCDFQGTRSVKRRRREHGVAVLNCDDNLDQKRQQVEQNSTTHTVKRSSRFQGVSRHKWTGRYEAHLWDKLSWNLTQKKKGEQVYLESAARAYDLAALKYWGTSTFTNFRISDYMKEIEIMQTMTKEGYLATLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGIHAVTNFDLSNYVTLLRPARGNIQEPTLESQIIPEVQTVASPSNYNSIEEAKTLALDSNLFYTDYLRSSQKQEVVEKEIVFISSNKSSSPTALGLLLRSSIFRELVEKNLNISGDEVDGEDAKDRQPHLSGDDELSRIFYDSIGDIPFANDTKRYNFARELHSIL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1349 364 FunFam AP2-like ethylene-responsive transcription factor 148 209 - -
Lele15g1349 364 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 36 242 - -
Lele15g1349 364 CDD AP2 148 209 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 CDD AP2 52 115 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 Pfam AP2 domain 148 199 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 Pfam AP2 domain 53 105 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 ProSiteProfiles AP2/ERF domain profile. 149 207 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 ProSiteProfiles AP2/ERF domain profile. 53 113 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 Gene3D AP2/ERF domain 52 115 IPR036955 GO:0003700|GO:0006355
Lele15g1349 364 Gene3D AP2/ERF domain 148 209 IPR036955 GO:0003700|GO:0006355
Lele15g1349 364 SUPERFAMILY DNA-binding domain 148 209 IPR016177 GO:0003677
Lele15g1349 364 SUPERFAMILY DNA-binding domain 52 114 IPR016177 GO:0003677
Lele15g1349 364 SMART rav1_2 53 119 IPR001471 GO:0003700|GO:0006355
Lele15g1349 364 SMART rav1_2 149 213 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1349 Lele-ChrLele15 7826241 7828139 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1349 135 215 AP2-EREBP Transcription Factor Family AT5G57390 40.449 9.13e-12 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele15g1349 AP2 2.8e-06 CL0081