Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1341 ATGACAATTAAAGGATGCTCAAACAAGGCCTGTGCTGCATGCAAGTATCAGAGAAGAAGATGCTCAAAGGAGTGCCCTTTGGCTCCCTATTTCCCTTCAGATCAACCTAAAAAGTTCAGCAACGCTCACCGTTTGTTTGGTGTCGCCAATGTTAAGAAGATTCTGGATCAGGTAGAGCCAAGGCAGAGAGACGAAGCCATGAAATCTATTATTTTTGAATCTGACATGCGAGAACAGTTTCCTGTTATGGGCTGCCTAGGAGTCATATGGAGTTACAATAATCAGATAATCGCTCTCATGGAAGAGTTACGTCATCTGAAACTGAGGCTTGCCGTTTACAAAGAACATTTCTATTATCATATTTCACACCAAATTTCTCCTTGTATTCCGATGAAATCTATGCCTGTCTGTGCAGATACATTGTCCTTGAATGAAGGTGTTATATTTGATGGCGGCGGCGGCGGCGGCGGCGGAAATGAAGTGTTTGGTCTTCAACAATCCTTCAATTCCATGAACGCACAATCATCTAATTTTGTGGACACAATTGAATATGACGATGTTAATCCTTATAATGTAATGGTTGATGATAGACAGTTATTTATTGAATACAAAGAAGAACCATGTCAGTCAAGTAAGGAGTCATCCTTGAGAGAAGAAAAGTGTCATATTGAGCGTGGTTCAACAAGTGAGCTTAAAAGTGCAGCAACATACTTGGGCCTGACGAGTGTGAAAGGATGA 738 0.4119 MTIKGCSNKACAACKYQRRRCSKECPLAPYFPSDQPKKFSNAHRLFGVANVKKILDQVEPRQRDEAMKSIIFESDMREQFPVMGCLGVIWSYNNQIIALMEELRHLKLRLAVYKEHFYYHISHQISPCIPMKSMPVCADTLSLNEGVIFDGGGGGGGGNEVFGLQQSFNSMNAQSSNFVDTIEYDDVNPYNVMVDDRQLFIEYKEEPCQSSKESSLREEKCHIERGSTSELKSAATYLGLTSVKG 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1341 245 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lele15g1341 245 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele15g1341 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1341 Lele-ChrLele15 7757852 7758733 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1341 1 114 AS2 family AT3G47870 54.386 5.31e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele15g1341 LOB 1.6e-36 No_clan