Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1339 ATGACGACTGTGATGGGGCAGCTGTGGGCACAATTGGCATCTCTAATGGCCACCGTCGTATTTTTATATACCATATTGGAGCCATTATTTCCTTCTCCTCTTCGTTCTCGTCTTCGAAAATTCACTGATAAATCCACCGCTTTTCTGTATCCTTACGTCCGAATCACCTTCCCTGAGTATACAGGGGAACGCCTTAAGCGCAGCGAACTCTTCACTTCCATTCAGACCTACCTCTCTCAAATCTCTTCTGAACGAGCCAAGAGGCTCAAAGCTGAAGCCCTTAATAGCACCCAAACCACCCCACTCTTGCTTACCATGGACGACAACGAAGAAGTCACCGACGAGTTTCAAGGTGTCAAACTCTGGTGGGTTGCTCGTAAAACTACTTCTGAGTCACACTCATACTTCAATCCTGCTACAGATGAGAAGAGATATTACAGGCTCACTTTTCACAGGAATCACCGAGATTTTGTTACTGGGGTTTACCTCAAACACGTTCTGGAAGAAGCCAAGGTGCTCCAGATGAAAAATAGGCGACTCAAGTTGTATACTAATACTGGGAGTAGTTGGAGCCATGTGGGTTTTGAGCATCCTGCAACATTTGAAACCCTGGCTTTGAAGCCGGAGAAGAAGGAGGAGATCATAGAGGACCTTGTTCGGTTCAAGACTGGTAAGGAGTACTATGGTACGATTGGGAAGACTTGGAAAAGAGGGTATTTGCTGTATGGCCCTCCAGGAACTGGTAAGTCTACGACGATAGCTGCCATGGCTAATTTCTTGAACTACGATATCTATGATCTCGAGTTAACCGCAGTGAAGGATAATACAAAGCTCAAAAAGCTGTTACTCAACACGTCAAGTAAATCTATTATTGTGATTGAAGACGTTGATTGCTCTCTGGATCTTGCTGCTCAAAGAAAGAAGAAAGAAAATGGAGACAAGGATGAGGAAGCAAAAGATGGTATGAAGAAACCAGAGGAAGAAGAAGAAGAAAAGAGCAGAAGCAGCAAGTTGACTCTGTCGGGACTGTTGAATGTGATAGATGGGATTTGGTCAGCTTGTGGGGGAGAGAAAGTGTTTGTTTTTACAACTAATTTTGTGGATAAGCTGGATTCTGCTCTTGTTAGGAGAGGACGCATGGATAAGCACATTGAACTGTCTTATTGTTGCTACGAAGCTTTCAAGGTGCTATCAAAGAATTACTTGGGAATTGAGAGTCACCATTTGTATCCAAGAATTGAGAGATTGTTTGCGAAGACAGAGATGACGCCTGCTGATGCTGCTGAGAATCTGATGCCAAAGTCAATGAAAGAGGACGCTGAAACTTGCTTGAATAGGTTGATTGAAGCTCTTGAGACGGCCAAGTTAGAGGCAGAGGAGAAAGAAAAGGAGCAATTGAAGCAGCCAGAGGAGAAGTGTAATGAAAAATATGGGGAACGAGAGATTGGAGGTCTTTCAGTCTGA 1464 0.4399 MTTVMGQLWAQLASLMATVVFLYTILEPLFPSPLRSRLRKFTDKSTAFLYPYVRITFPEYTGERLKRSELFTSIQTYLSQISSERAKRLKAEALNSTQTTPLLLTMDDNEEVTDEFQGVKLWWVARKTTSESHSYFNPATDEKRYYRLTFHRNHRDFVTGVYLKHVLEEAKVLQMKNRRLKLYTNTGSSWSHVGFEHPATFETLALKPEKKEEIIEDLVRFKTGKEYYGTIGKTWKRGYLLYGPPGTGKSTTIAAMANFLNYDIYDLELTAVKDNTKLKKLLLNTSSKSIIVIEDVDCSLDLAAQRKKKENGDKDEEAKDGMKKPEEEEEEKSRSSKLTLSGLLNVIDGIWSACGGEKVFVFTTNFVDKLDSALVRRGRMDKHIELSYCCYEAFKVLSKNYLGIESHHLYPRIERLFAKTEMTPADAAENLMPKSMKEDAETCLNRLIEALETAKLEAEEKEKEQLKQPEEKCNEKYGEREIGGLSV 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1339 487 Gene3D - 385 468 - -
Lele15g1339 487 Pfam Domain associated at C-terminal with AAA 30 124 IPR025753 -
Lele15g1339 487 MobiDBLite consensus disorder prediction 458 487 - -
Lele15g1339 487 PANTHER BCS1 AAA-TYPE ATPASE 11 461 - -
Lele15g1339 487 Pfam ATPase family associated with various cellular activities (AAA) 240 387 IPR003959 GO:0005524|GO:0016887
Lele15g1339 487 Coils Coil 437 468 - -
Lele15g1339 487 SMART AAA_5 235 390 IPR003593 -
Lele15g1339 487 Gene3D - 191 384 IPR027417 -
Lele15g1339 487 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 437 IPR027417 -
Lele15g1339 487 CDD AAA 236 388 - -
Lele15g1339 487 MobiDBLite consensus disorder prediction 458 479 - -
Lele15g1339 487 MobiDBLite consensus disorder prediction 309 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1339 Lele-ChrLele15 7743877 7745340 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1339 149 386 Calmodulin-binding Proteins AT3G56690 25.703 1.12e-09 59.3