Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1334 ATGGACGAGCCACTTGGTAATACTCATGCCGAGAACATCGATTCTGATTCTCTCGTTTGCTCCCTCCAAGAGCCTAGCGTTAGCAAGATGAGCAATAATAGCAATGTTGAGTCTCACAGCAGCACCGAATCCAACAGTTACGATGAAAGTTACAAGAGCAGCTCCAGTTGTGACGCCAATGATTCATCAAGTCTTAGGAGCTTTTGCCCTTGCAAGCCTCACAAGGGCAACGATATACGATGGGATGCAATACAGTTCGTGAAAGCTAAGTACGGTGATTTGGGTTTGGGACATTTCAGGCTGTTGAAGAAGCTGGGTTTTGGGGACATTGGAAGCGTTTATCTGGCCCAGCTTAAAGGGAAAGGTTGTCTCTTCGCAATGAAGGTCATGGATAAGGCAAAGTTAACTGCAAGGAGAAAAATGTCCAGAGTCCAGACTGAGAGGGACATTTTGATTTCCTTGGACCACCCTTTCCTTCCCACCCTTTATTCTCATTTCCAAACAGATAAATTCTCTTGCTTGCTTATGGAGTTCTGCAATGGTGGTGATCTTCACGTCCTCCGCCAGCGCCGGCCAGGCAAGCATTTCACAGAGCAATCTGCAAGGTTTTACATTTCTGAAGTTCTACTTGCTCTTGAGTATCTCCACATGATGGGGGTGGTATACAGGGACTTGAAGCCTGAGAATGTACTGGTTCGTGAGGATGGTCATATCATGCTCTCTGATTTTGATCTATCATTAAGATGTTGTGTAAGACCCACCCTTGTTCAGTCCAACGAAGAACCTTCTCGTCAAGTTTCTTCCTACTGTGTCGAGCCATCATCTTCGTGCATAGACCCATCTTGCAAGCTACCTGTTTGTGTGGAGGCTTCATGCTTGCAATTGCAGCCTTCTTGCTTCAAACCCCATGTTTTCAATTCCAAAAAGACCAAATCAAAGAGTACTGTTAAACAAAATTCAACCAATCCAGATTCATATCCTATGCTTATTGCTGAGCCAACCAACGCTCGCTCTATGTCATTTGTTGGGACTCATGAATATCTGGCCCCAGAGATTATAAGAGGCGATGGTCATGGGAGTGCTGTGGATTGGTGGACGTTTGGTATTTTCTTGTATGAGTTATTGCATGGGAAGACACCATTTAAGGGCAATGGAAACAGAGAGACACTGTTCAACGTTGTTGGGCAGCCTCTTAAGTTTCCTGAAGGACCATCAAACATCAGTTTTGCTGCAAAGGATTTAATAAGAGGATTGCTTGTGAAAGACCCAAAGAAGAGGCTTGGGTTTCAGAGAGGTGCCTCTGAGATCAAACAACATGCTTTCTTTCAAAGTGTTAATTGGGCTCTGGTTCGTAGTAACCAACCCCCACTGATCCCAAAACCACTTGATCTTGCAGTTTTGAATGAGACATTGAAGCTGTCAGCGCCTGTTAATGACGACAAAGGAAACTCTGATAATTCCAACAGGTCTTCAGGTCCTTACTTGGAGTTTGAATTTTTTTGA 1503 0.4438 MDEPLGNTHAENIDSDSLVCSLQEPSVSKMSNNSNVESHSSTESNSYDESYKSSSSCDANDSSSLRSFCPCKPHKGNDIRWDAIQFVKAKYGDLGLGHFRLLKKLGFGDIGSVYLAQLKGKGCLFAMKVMDKAKLTARRKMSRVQTERDILISLDHPFLPTLYSHFQTDKFSCLLMEFCNGGDLHVLRQRRPGKHFTEQSARFYISEVLLALEYLHMMGVVYRDLKPENVLVREDGHIMLSDFDLSLRCCVRPTLVQSNEEPSRQVSSYCVEPSSSCIDPSCKLPVCVEASCLQLQPSCFKPHVFNSKKTKSKSTVKQNSTNPDSYPMLIAEPTNARSMSFVGTHEYLAPEIIRGDGHGSAVDWWTFGIFLYELLHGKTPFKGNGNRETLFNVVGQPLKFPEGPSNISFAAKDLIRGLLVKDPKKRLGFQRGASEIKQHAFFQSVNWALVRSNQPPLIPKPLDLAVLNETLKLSAPVNDDKGNSDNSNRSSGPYLEFEFF 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1334 500 Gene3D Transferase(Phosphotransferase) domain 1 183 250 - -
Lele15g1334 500 ProSiteProfiles Protein kinase domain profile. 99 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1334 500 PANTHER FLIPPASE KINASE 1-RELATED 26 464 - -
Lele15g1334 500 FunFam Serine/threonine-protein kinase D6PK-like 97 182 - -
Lele15g1334 500 FunFam serine/threonine-protein kinase D6PK-like 336 460 - -
Lele15g1334 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 220 232 IPR008271 GO:0004672|GO:0006468
Lele15g1334 500 Pfam Protein kinase domain 338 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1334 500 Pfam Protein kinase domain 100 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1334 500 Gene3D Phosphorylase Kinase; domain 1 97 182 - -
Lele15g1334 500 FunFam serine/threonine-protein kinase D6PK-like 183 250 - -
Lele15g1334 500 MobiDBLite consensus disorder prediction 24 64 - -
Lele15g1334 500 SUPERFAMILY Protein kinase-like (PK-like) 77 466 IPR011009 -
Lele15g1334 500 CDD STKc_phototropin_like 98 465 - -
Lele15g1334 500 SMART serkin_6 99 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1334 500 Gene3D Transferase(Phosphotransferase) domain 1 335 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1334 Lele-ChrLele15 7722794 7724373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1334 48 500 AGC Kinase Gene Family AT5G40030 71.586 0.0 664
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele15g1334 Pkinase 8.5e-38 CL0016