Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1333 ATGGATTATCGGCTGCTTCTGGCACTTTCTCTCAGTTTCCTCTGTATTCTCCCTGATCTCTCCGTTTCTTCAATTCGTTTGCGGAACTCGGTCGAAGACAAGAGCACTGGCGGATCAGTGCTTAAATTGAACAAAGAACGTTCTTCAGTGGCGGTTGATCCTAGTCGGGTCACTCAACTCTCGTGGCGCCCTAGAGCCTTTCTATACAAGGGATTCTTGTCTGAGGAAGAATGTGACCATTTGATCGTTCTGGCGAAGGATAAGCTAGAAAAGTCTATGGTGGCGGATAATGAGTCAGGCAAAAGTGTAGAGAGTTCAGTCAGAACAAGCTCTGGAATGTTTCTTGAAAATGCCCAGGATGACATAGTTTCCCTCGTTGAAGAAAGACTTGCTGCATGGACCTTCCTTCCAATAGAGAATGGCGAGCCTATTCAAATATTGCACTATGAGAATGGTCAGAAGTATGAGCCACATTTTGATTTTTTTCACGATGAGGTTAACCAACGAATGGGTGGCCATCGGGTGGCCACCGTGCTGATGTATTTGTCCAATGTTGAGAAGGGCGGGGAGACAATTTTTCCCAATTCCGAGGCAAAGTCTTCCCAGCCAAAGGATGAGAATTGGTCTGAATGTGCTCACAGAGGCTATGCAGTAAAACCTGAAAAGGGAGATGCCTTGCTGTTCTTCAGCCTTCGTCCAGATGCGATGACAGATACTAGCAGCTTGCATGGAAGCTGCCCGGTAATAAAGGGGGAAAAGTGGTCGGCGACAAAGTGGATACATGTGGCGGACTATAGTAAACCAATAAGAAAGGGAAGTGATTCTGGAAAATGTGTGGATGAGAATGAGAATTGCGCAGAGTGGGCTAAGAGAGGTGAATGTGAGAAGAACCCTCTTTATATGGTTGGAAGTGATGCAGGCAGAGGATATTGCAGGAAGAGTTGCAATGTCTGCTCTTCTTAG 963 0.4621 MDYRLLLALSLSFLCILPDLSVSSIRLRNSVEDKSTGGSVLKLNKERSSVAVDPSRVTQLSWRPRAFLYKGFLSEEECDHLIVLAKDKLEKSMVADNESGKSVESSVRTSSGMFLENAQDDIVSLVEERLAAWTFLPIENGEPIQILHYENGQKYEPHFDFFHDEVNQRMGGHRVATVLMYLSNVEKGGETIFPNSEAKSSQPKDENWSECAHRGYAVKPEKGDALLFFSLRPDAMTDTSSLHGSCPVIKGEKWSATKWIHVADYSKPIRKGSDSGKCVDENENCAEWAKRGECEKNPLYMVGSDAGRGYCRKSCNVCSS 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1333 320 Gene3D - 268 319 - -
Lele15g1333 320 Pfam 2OG-Fe(II) oxygenase superfamily 145 261 IPR044862 -
Lele15g1333 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 140 262 IPR005123 -
Lele15g1333 320 Gene3D q2cbj1_9rhob like domain 56 262 - -
Lele15g1333 320 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 49 263 IPR045054 -
Lele15g1333 320 SMART ShkT_1 277 319 IPR003582 -
Lele15g1333 320 Pfam ShK domain-like 277 318 IPR003582 -
Lele15g1333 320 FunFam Prolyl 4-hydroxylase 4 56 262 - -
Lele15g1333 320 ProSiteProfiles ShKT domain profile. 278 318 IPR003582 -
Lele15g1333 320 SMART p4hc 64 261 IPR006620 GO:0005506|GO:0016705|GO:0031418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1333 Lele-ChrLele15 7719570 7721596 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1127 13 22016769 22021574 Lele15g1333 15 7719570 7721596 hybridization