Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1319 ATGTTATGGGTTGTAATTATTAAGCAACAGAGATCTGATTGGAGAGAAATGGCAAGACAGACAAGCTTGGATGGGGAAATTATGACATCTGACGCAACAGGATCATCAGCAAGTCATCCACCAACCGAAGTATCTGAAATTATCCAAATAAACAAAGATTGTCAGAAACAAGATTCAAAGAAGAGCAAGGCCAAAGCAGAAAGCCATAAAACAGTTCCCTTCTACAAGCTTTTCTCATATGCTGATACTTTTGATCGTCTTCTCATGTTTGTTGGGACAACGGCAGCAGTTGCTAATGGAATGACTGTACCTCTATTAATGATAATTTTTGGAAATGTCATTGATGCATTTGGAGGAACTAGCGACACCAAAGAAATTGTTCATAATGTCTCCAAGGCGTCTCTCGACTTTGTATACTTGGCTATGGGTACCTTTGTAGCTTCATTTTTGCAGGTGACTTGCTGGATGGTCACTGGAGAGAGACAGTCTGCAAGGATAAGAAGCTTATACCTTGAAGCAATTTTGAGACAAGAAGTAAGCTTCTTTGATAGGGAAACCAATAGCGGAGAGGTTATTACAAGGATGTCAGGTGACACAGTTCTCATTCAAGATGCCATGGGAGAGAAAGTAGGAAAGTTCATACAGCATGTGGCAACATTTGTGGGAGGTGTGGTCATATCATTTTCCAAGGGCTGGCTTCTCACCCTTGTCCTGCTATCTTTTCTTCCACTTTATATCCTCTCTGGTGCCTTGATGAGCTTCGTGGCTGCAAAGATGGCATGTCGCGGCCAAGCAGCCTATTCCACAGCAGCAAATGTGGTGGACCAGACAATCAGTTCCATTCGAACTGTTGCATCATTCACAGGGGAGAAGCAAGCTATAAGCCAGTATAATGAATCTTTAATAAAAGCTTACCGTGCTGGCGTGGTAGAGGGAGCAGCTTCTGGTTGCGGCTTAGGTTCAGTTCGTTTGTTTTTGTTCTCTAGTTATGCTTTGGCCACATGGTATGGAGGGAAGATGGTACTAGAGAAAGGATATACAGGAGGCCAAGTCATGAGTATCTTTTTTGCAATATCTACTTGCTCCCTGTATCTAGGGCAGTCATCTCCAAGTTTGCTTGCATTTGCAGCGGGACAAGCTGCAGCTGTTAAAATGTTTGAAACAATCAAGAGGAAACCAGAAATTGATGCTTATGACACTTCTGGTAAGAAGTTGGATGACCTCAAAGGAGATATAGAACTAAAGGAGGTTTGCTTTAGTTATCCTACAAGACCAAATGAACTAATATTCAATGGATTTTCTCTATCAATACCAAGTGGCACTACTACTGCCTTGGTAGGGCAAAGTGGGAGCGGGAAATCAACTGTTATCAATTTGATAGAAAGGTTTTATGATCCACAATCTGGTGAAGTTCTCATAGACAATATCAATCTCAGAGAGTTTAACTTAAAATGGGTTAGAGGCAAAATAGGCCTTGTCAGCCAGGAACCAATTCTCTTCACTTGTAGTGTTAAAGAGAATATTGCTTATGGTAGAGATGGTGCAACCGATGAAGAAATCAGAGCTGCAGCAGAACTTGCTAATGCTACTAAATTTATTGATAAATTTCCTCAGGGACTAGACACAATGGTAGGCGAGCATGGAACTCAGCTCTCTGGGGGTCAAAAGCAGAGAATCGCAATCGCAAGAGCAATCTTGAAAGGCCCAAAAATTTTACTTCTTGATGAAGCTACCAGTGCCCTGGATGCCGAATCTGAGAGAGTAGTGCAGGAGGCATTGGACAGAATTATGATAAGCAGAACTACTGTAATTGTAGCCCACCGCTTAAGTACTATAAGGAACGCAGATATAATAGCTGTTATTCATCAAGGAAAGATAGTGGAAAAAGGTTCACATGCAGAGCTCACAGAGGATCCAGATGGAGCCTATAGCCAGCTCATTAGATTGCAGGAAACTAAAAGCGAACAAGAACAAAATAGTGCAAATTACAAGGATAAGCCTGAAAGCTTTCAGGACTCAGGACGACAATCAAGTCAACGATTTTCTTTCCTTCGATCAACAAGCCAAGGATCATCTGGTAAAGGAAACAGCGGTCGTCACTCTTTCTCAAGTCTCACTTCTGGAACAGCAGCAGGAGATTCTGATGCATCACATAACCCTGCCAAAGTCTCACTTCTCCGCCTTGCTTGTCTTAACAAGCCTGAATTCCCAGTGTTACTCTTGGCTACTTTGGCCGCAACACTAAATGGAGCAGTATTACCTTTTTTGGGACTCCTGCTATCTGGCATGATACATACTTTCTTTGAGCCTGCAGATAAACTCCGTAAAGATTCAAAATTCTGGGCATACGTGTTTGTTGCACTTGCTGTGGCAGCCTTCTTTGTGAATTCCATAAGGTCCTACCTTTTTGGTGTAGCTGGTTGTAAGCTGATAAAAAGGATTCGTCTATTGTGTTTTGAGAAAATAATTCACATGGAAATAGGTTGGTTTGACAAAGCTGAGAATTCAAGTGGGGCACTTGGAGCTAGACTTGCTACTGATGCTGCTGCTATTCGAGCTGTGGTTGGGGATGCACTAGGCTTGCTGATTCAAGATATTTCCACTGGAATCTCTGCCTTAGTAATTGGCTTTGAGGCAAGCTGGCAGCTTTCATTGATCATTCTTGCTATGCTACCTTTACTGGTAGTAGTAAATGCTCAGGTGCATACTAAATCCATCCGAGGATTCAGTTCAGATGCAAAGAAACAATATGAGGAAGCAAGTCAAGTTGCAAATGATGCAGTGGGGAGTATTAGGACAGTGGCTGCTTTCTGTGCTGAAGAGAAGGTGATGGAGTTATACTATAAGAAATGTGAAGGACCAATAAAAGTAGGCATAAGGCAAGGATTAATCAGCGGAACTGGTTTAGGTGTATCGTTCCTTGTCTTGTATTCTGTCTATGGATGCAGCTTTTATGTTGGTGCTCGACTTGTTCAAGATGGCAAAATATCAATCTCACATGTTTTTCGTGTGTTCTTTGTTCTCACTATGGCAGCTGTAGCACTATCGCAATCTGGTTTAATGGCCCCAAGTGCAAGCAAAGCAACAGTTTCTGTCGCTTCTATATTTGATATTCTTGATCAGAAATCAAAAATAGACCCCAGTGATGTCTCTGGATTGACAATGGAAGATTTGAAGGGAGAAGTTGAGTTTCGTCATGTTGCTTTCAAGTATCCCATCAGGCCAGATGTTCAAATATTTAGAGATCTTTGCTTGACCATTCATTCAGGAAAGACTGTTGCACTAGTGGGAGAAAGTGGAAGTGGAAAGTCTACTGTGATCTCATTGCTACAAAGATTCTATGATCCAAACTCAGGTCACATTACATTAGATGGAATCGAAATTCACAAGCTACAGATCAAATGGTTAAGACAACAAATGGGTTTAGTAAGCCAGGAGCCAATGCTGTTTAATGACACTATTCGAGCTAATATTGCATATGGAAAGGAAGGAGATGCGACAGAAGCAGAAATCATAGCCGCTGCAGAACTGGCAAATGCTCACAAGTTCATCAGCAGCTTGTATCAGGGGTATGACACAATTGTGGGGGAGAGAGGAGTTCAATTATCTGGGGGACAAAAGCAACGAGTGGCAATTGCAAGGGCCATTGTGAAGAATCCAAAGATATTATTGCTAGATGAAGCCACAAGTGCTCTTGATGCTGAATCTGAAAAAGTGGTTCAAGATGCACTAGATCGTGTCGTAGTGGATAGAACCACAATTGTTGTGGCTCATAGGTTATCCACAGTTAAGAATGCAGATTTAATTGCAGTGCTTCAAAATGGAGTCATTGCAGAGAAGGGAAACCATAAAACTTTGCTCAAAAAGGGCAGAGCCTATGCTTCCTTACTAGCACTGCACAAAAGTACTTATTCATCATAA 3921 0.418 MLWVVIIKQQRSDWREMARQTSLDGEIMTSDATGSSASHPPTEVSEIIQINKDCQKQDSKKSKAKAESHKTVPFYKLFSYADTFDRLLMFVGTTAAVANGMTVPLLMIIFGNVIDAFGGTSDTKEIVHNVSKASLDFVYLAMGTFVASFLQVTCWMVTGERQSARIRSLYLEAILRQEVSFFDRETNSGEVITRMSGDTVLIQDAMGEKVGKFIQHVATFVGGVVISFSKGWLLTLVLLSFLPLYILSGALMSFVAAKMACRGQAAYSTAANVVDQTISSIRTVASFTGEKQAISQYNESLIKAYRAGVVEGAASGCGLGSVRLFLFSSYALATWYGGKMVLEKGYTGGQVMSIFFAISTCSLYLGQSSPSLLAFAAGQAAAVKMFETIKRKPEIDAYDTSGKKLDDLKGDIELKEVCFSYPTRPNELIFNGFSLSIPSGTTTALVGQSGSGKSTVINLIERFYDPQSGEVLIDNINLREFNLKWVRGKIGLVSQEPILFTCSVKENIAYGRDGATDEEIRAAAELANATKFIDKFPQGLDTMVGEHGTQLSGGQKQRIAIARAILKGPKILLLDEATSALDAESERVVQEALDRIMISRTTVIVAHRLSTIRNADIIAVIHQGKIVEKGSHAELTEDPDGAYSQLIRLQETKSEQEQNSANYKDKPESFQDSGRQSSQRFSFLRSTSQGSSGKGNSGRHSFSSLTSGTAAGDSDASHNPAKVSLLRLACLNKPEFPVLLLATLAATLNGAVLPFLGLLLSGMIHTFFEPADKLRKDSKFWAYVFVALAVAAFFVNSIRSYLFGVAGCKLIKRIRLLCFEKIIHMEIGWFDKAENSSGALGARLATDAAAIRAVVGDALGLLIQDISTGISALVIGFEASWQLSLIILAMLPLLVVVNAQVHTKSIRGFSSDAKKQYEEASQVANDAVGSIRTVAAFCAEEKVMELYYKKCEGPIKVGIRQGLISGTGLGVSFLVLYSVYGCSFYVGARLVQDGKISISHVFRVFFVLTMAAVALSQSGLMAPSASKATVSVASIFDILDQKSKIDPSDVSGLTMEDLKGEVEFRHVAFKYPIRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPNSGHITLDGIEIHKLQIKWLRQQMGLVSQEPMLFNDTIRANIAYGKEGDATEAEIIAAAELANAHKFISSLYQGYDTIVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVVVDRTTIVVAHRLSTVKNADLIAVLQNGVIAEKGNHKTLLKKGRAYASLLALHKSTYSS 1306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1319 1306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1054 1298 IPR027417 -
Lele15g1319 1306 Gene3D ABC transporter type 1, transmembrane domain 707 1050 IPR036640 GO:0005524|GO:0016020
Lele15g1319 1306 FunFam ABC transporter B family member 1 402 651 - -
Lele15g1319 1306 MobiDBLite consensus disorder prediction 653 716 - -
Lele15g1319 1306 SUPERFAMILY ABC transporter transmembrane region 727 1046 IPR036640 GO:0005524|GO:0016020
Lele15g1319 1306 SUPERFAMILY ABC transporter transmembrane region 70 396 IPR036640 GO:0005524|GO:0016020
Lele15g1319 1306 Pfam ABC transporter 1082 1230 IPR003439 GO:0005524
Lele15g1319 1306 Pfam ABC transporter 431 579 IPR003439 GO:0005524
Lele15g1319 1306 PANTHER ABC TRANSPORTER B FAMILY 55 789 - -
Lele15g1319 1306 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1062 1299 IPR003439 GO:0005524
Lele15g1319 1306 Coils Coil 1306 1306 - -
Lele15g1319 1306 Coils Coil 646 666 - -
Lele15g1319 1306 Gene3D - 1052 1305 IPR027417 -
Lele15g1319 1306 FunFam ABC transporter B family member 1 1052 1301 - -
Lele15g1319 1306 CDD ABC_MTABC3_MDL1_MDL2 1062 1296 - -
Lele15g1319 1306 MobiDBLite consensus disorder prediction 653 714 - -
Lele15g1319 1306 FunFam ABC transporter B family member 1 719 1028 - -
Lele15g1319 1306 FunFam ABC transporter B family member 9 76 409 - -
Lele15g1319 1306 Gene3D - 436 659 IPR027417 -
Lele15g1319 1306 ProSitePatterns ABC transporters family signature. 1202 1216 IPR017871 GO:0005524|GO:0016887
Lele15g1319 1306 ProSitePatterns ABC transporters family signature. 551 565 IPR017871 GO:0005524|GO:0016887
Lele15g1319 1306 CDD ABC_6TM_Pgp_ABCB1_D2_like 731 1045 - -
Lele15g1319 1306 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 404 650 IPR027417 -
Lele15g1319 1306 Gene3D ABC transporter type 1, transmembrane domain 91 435 IPR036640 GO:0005524|GO:0016020
Lele15g1319 1306 Pfam ABC transporter transmembrane region 739 1012 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1319 1306 Pfam ABC transporter transmembrane region 89 360 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1319 1306 CDD ABC_6TM_Pgp_ABCB1_D1_like 89 372 - -
Lele15g1319 1306 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 412 648 IPR003439 GO:0005524
Lele15g1319 1306 SMART AAA_5 439 611 IPR003593 -
Lele15g1319 1306 SMART AAA_5 1089 1282 IPR003593 -
Lele15g1319 1306 CDD ABC_MTABC3_MDL1_MDL2 412 650 - -
Lele15g1319 1306 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 740 1027 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele15g1319 1306 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 90 377 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1319 Lele-ChrLele15 7626213 7631224 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1319 31 1305 Calmodulin-binding Proteins AT2G36910 43.451 0.0 1032