Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1315 ATGGCGGGTGGGACGGAAGCCTTCCCGCATTTGGGATCACACTGCCATCACGTTGATTGCCATCAACTCGATTTTCTCCCTTTCACATGCGACGCCTGCTCTCAGGTTTTCTGCTTGGAACATCGATCTTACAGGTCCCACGATTGCCCCAAATCAGACCATAACAGCAGGAAGGTTGTGGTTTGCCCGACATGTTCCATGTCAATTGAGACCACAGGTTATAAGGAAGACGACGAGAAGGCTATATTGGAGAAGCATGACAGATCTGGAATTTGTGACCCCAGCAAGAAGAAAAAGCCCACTTGTCCTGTAAGAAGGTGCAAGGAGGTTTTGACGTTTTCTAATACCTGCACTTGTAAAACTTGCAACCTCAAGGTGTGCCTCAAGCATCGCTTTCCTGCGGATCACGCATGTAAGGGAGTAACCTCGTATTCTTCGTCATCACCTGAGGCTACTGCAAATGGGGGTTGGATGGATCGGTTCTTGGCTGCTCTAACTTGGAGGAATGGAGAGCAATGTTCCAGAAGCACCTCATCTCCTCGTAATCCATCTGTTCAAATCTGCTGA 567 0.4868 MAGGTEAFPHLGSHCHHVDCHQLDFLPFTCDACSQVFCLEHRSYRSHDCPKSDHNSRKVVVCPTCSMSIETTGYKEDDEKAILEKHDRSGICDPSKKKKPTCPVRRCKEVLTFSNTCTCKTCNLKVCLKHRFPADHACKGVTSYSSSSPEATANGGWMDRFLAALTWRNGEQCSRSTSSPRNPSVQIC 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1315 188 Gene3D - 78 155 IPR035896 -
Lele15g1315 188 SMART AN1_Zf_4 102 143 IPR000058 GO:0008270
Lele15g1315 188 SMART AN1_Zf_4 15 54 IPR000058 GO:0008270
Lele15g1315 188 SUPERFAMILY AN1-like Zinc finger 8 57 IPR035896 -
Lele15g1315 188 Pfam AN1-like Zinc finger 102 140 IPR000058 GO:0008270
Lele15g1315 188 Pfam AN1-like Zinc finger 15 52 IPR000058 GO:0008270
Lele15g1315 188 PANTHER ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATED 7 154 - -
Lele15g1315 188 SUPERFAMILY AN1-like Zinc finger 93 146 IPR035896 -
Lele15g1315 188 ProSiteProfiles Zinc finger AN1-type profile. 9 57 IPR000058 GO:0008270
Lele15g1315 188 Gene3D - 2 66 IPR035896 -
Lele15g1315 188 ProSiteProfiles Zinc finger AN1-type profile. 96 146 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1315 Lele-ChrLele15 7602793 7603444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1315 2 173 C2H2 Transcription Factor Family AT3G28210 61.272 5.33e-75 221