Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1303 ATGGAACAACTTTCCATGTGGGTAATCCTCGTGTCATTCTTTCTCCTCCTGAACACTAGCAATTGTGTGGAGGACAAGGTCAGCAGCACACTGATAAACTTTCTTGCAAAACTCTCTAACAACAATGGCCGCCAGAACTCTAATTTGGTCTGGAAGCCAGGCTCTGATCCCTGCAGGAACTTGTGGCAAGGTGTGGTATGTGATGATGAAAATGCTTCAGTACAGAAGCTATTTCTTAACAGGTCCAATTTAGCTGGAACTCTTGATGTTGCCATGCTTTGCAACCTGCAGCCCCTCGTCGCGTCTCTAATATCTCTTAACCTCGACGGCAACAACATAAGTGGAGGACTAGCAAATGAGGTTGGAAACTGCAAGCATCTCACTCACCTGAATGTAAGTAGTAACCAACTTACTGGGATCCTGCCTAGCTCACTTGCCGTGTTGGGTAACTTAAAAGAACTTGACATCTCCAACAATAGCTTCTCCGGGAACTTGCCAAACATGTCCACAATCTCTGGACTGAATGCCTTTTTGGCACAAGATAATCAACTCACTGGGGAGATACCCCCTTTGAACTTTTCCAAATTTGACTACTTCAATGTATCTTTCAACAATCTAACTGGCCGTATTCCAGATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTGGGAAACACTGAGCTTTGTGGAAACCCTTTGCCAAAGAACTGTTCATCTCTCCCTGTATCCGATGCCAAACCGTCTGATTTAGAAGAAACGAAGGGTCCTTCTAAAAGCCAGATTCTTATGTATTCAGGATATGCTGCACTGTGTTTGATCTTCATCCTTTTTGTAGTTCTTGCGCTGTGTAGAAGAAACAAGAAAGGAAACAAGGTTGAAGTAGAAAAGGAGGCAACTGATGACAGTACTGCTGACAAACCTAGCCATGTTTCAAATGACTACAAATTAAGCTTGAGCAGACCAGAGTTTTCAGTCGCTACTGAAAGTGGGATGGTTTCACAATCACTTGTAGTTCTTTCAAGGCCAAATGTAAATGATATTACATTGGAGGACTTGATGAGGTCCCCTGCTGAACTGATTGGGCGAGGAAAATTTGGTAGTCTTTATAAAGTGATGTTGGAAAATGGGATGTTGGTGGTGGTTAAGAGGATTAATGACTTGATCATATCAAGCCGTGACTTCAAACAAAGGATGCAAATGCTGAGCCAAGTGAAGCACCTTTCTGTACTCTCACCTCTTGCTTTCTATTGTTGCAAACAAGAGAAACTTTTGGTCTATGAATATCAGGAGAATGGAAGTTTGTTCAAGCTTCTACATGGTTCCTCAAAAGACTTTGATTGGACCAGAAGGCTTGGGGTTGCAGCTACAATTGCAGAGGCATTAGCTTCCATGCATCAAGAGCTTGAAGAATGTGGGATCGCACATGGTAACTTGAAATCCTCCAATATTTTGCTAAACGGGAATATGGAGCCCTGCATAAGCGAGTACGGCGCTATGGTTATGGATGATCAAGAACTTAAAATTCAACAGAGTTCATCTTTTGTCAGTTCTTATGCTGCTGGTGCATCAGATGCCTTCAAGGGAGACGTTTATGGCTTTGGAGTGATTCTTCTGGAACTGCTTACTGGGAAGTTAGTGAAGAGCAATGGGATGGATTTGACCGAGTGGGTTGAGTCTGTTGTAAGGGAAGAATGGACGGGTGAAGTGTTTGACAGGTCCCTGATATCAGAGTATGCCAGTGAAGAGAGGTTGGTGAACTTGCTTCAAGTGGCTATAAAATGTATTAATCATTCTCCAGAGGCTAGGCCAAGTATGAACCAAGTTGCTGGCATGATCAACTTCATAAAAGAGGAAGAAGAGAAATCCTTGATTTATGAACCATAA 1884 0.4273 MEQLSMWVILVSFFLLLNTSNCVEDKVSSTLINFLAKLSNNNGRQNSNLVWKPGSDPCRNLWQGVVCDDENASVQKLFLNRSNLAGTLDVAMLCNLQPLVASLISLNLDGNNISGGLANEVGNCKHLTHLNVSSNQLTGILPSSLAVLGNLKELDISNNSFSGNLPNMSTISGLNAFLAQDNQLTGEIPPLNFSKFDYFNVSFNNLTGRIPDLQNHFSADSFLGNTELCGNPLPKNCSSLPVSDAKPSDLEETKGPSKSQILMYSGYAALCLIFILFVVLALCRRNKKGNKVEVEKEATDDSTADKPSHVSNDYKLSLSRPEFSVATESGMVSQSLVVLSRPNVNDITLEDLMRSPAELIGRGKFGSLYKVMLENGMLVVVKRINDLIISSRDFKQRMQMLSQVKHLSVLSPLAFYCCKQEKLLVYEYQENGSLFKLLHGSSKDFDWTRRLGVAATIAEALASMHQELEECGIAHGNLKSSNILLNGNMEPCISEYGAMVMDDQELKIQQSSSFVSSYAAGASDAFKGDVYGFGVILLELLTGKLVKSNGMDLTEWVESVVREEWTGEVFDRSLISEYASEERLVNLLQVAIKCINHSPEARPSMNQVAGMINFIKEEEEKSLIYEP 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1303 627 Gene3D Transferase(Phosphotransferase) domain 1 430 625 - -
Lele15g1303 627 MobiDBLite consensus disorder prediction 291 313 - -
Lele15g1303 627 Gene3D Phosphorylase Kinase; domain 1 325 428 - -
Lele15g1303 627 MobiDBLite consensus disorder prediction 291 308 - -
Lele15g1303 627 Gene3D Ribonuclease Inhibitor 98 171 IPR032675 -
Lele15g1303 627 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Lele15g1303 627 Gene3D Ribonuclease Inhibitor 22 97 IPR032675 -
Lele15g1303 627 ProSiteProfiles Protein kinase domain profile. 354 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1303 627 Pfam Protein tyrosine and serine/threonine kinase 358 609 IPR001245 GO:0004672|GO:0006468
Lele15g1303 627 Gene3D Ribonuclease Inhibitor 172 240 IPR032675 -
Lele15g1303 627 PANTHER OS05G0588300 PROTEIN 8 617 - -
Lele15g1303 627 SUPERFAMILY L domain-like 48 237 - -
Lele15g1303 627 SUPERFAMILY Protein kinase-like (PK-like) 357 615 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1303 Lele-ChrLele15 7542801 7544766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1303 3 619 Receptor kinase-like Gene Family AT5G53320 33.174 3.23e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele15g1303 PK_Tyr_Ser-Thr 2e-22 CL0016