Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1300 ATGGTTACCATCGTTGCCTGCGTCTGTTCCTTCGCGTTCGTCTTTTTGCCGCATTCTTTCTCCTGCGACTCAGCAAGTCCCCGTCTTATTCCTCTCTCTCCGTTCTCGGCCGCGGAATCCGTTCACCCCGGAATCCGCCATGGAAGGATGTATAGAATAATATCCACGCCGGCCCATAAATTCCGCCAATTCGGGAGAATCCAAGCCAAGCCCTCCGGCGCCACCACCGACGAGGAACACGCCTACCTCATCCTATGGCGTCATCAAATCCTAGACCCCGACAGCGACATCGTTTCACGTTGGAACAGGATCTTCCTCATTACCAGTCTCGTCGCGCTTTTCATCGACCCTCTTTATTTATATCTCCCCTTCATCGGAGGACCCGGTTGCTTGCAAACCAATACGGAATTGAGCGTCATCGTCACTCTTCTCCGCTCATTCTCTGACCTTTTCTACGTGCTCCACATGATCATGAAATTTCGGACCGCCTTCGTCGCCCCAAATTCTAGGATTTTCGGTCGGGGCGAGCTGGTTACCGATGCCCGAGAAATTGCCAGACGCTACTTGAAGTCTGATTTTGTTATCGATCTGGCTGCAACTCTTCCACTGCCCCAGATTGTCATTTGGTTAGTGCTTCCATCGTCCTCGGCTGACCATGCCCACATCACTCTTGCTCTTTTCGTGCTTATTCAGTATGTTCCTCGACTGTTTCTTATCTTCCCGTTGAACAAACGTATTATCAAAACCTCTGGTGTTGTTGCCAAGACTCCATGGACTGGAGCTGCATATAATCTTCTACTCTACTTGCTAGCTAGTCATGTTGTAGGAGCAACTTGGTATTTATCCGCGATAGCACGACAATTAAACTGTTGGACTGAAGAGTGCAGAGCTGAGAACCAATTACAAACCCTGTCTTGCCTTATAACTTATCTTGATTGCGAGAGTTTGGTCAACCCTGATAGGCAATACTGGTTAAATGTTACCAACGTTGTTAAGAGTTGCGATGTAAAGAGCGGAGATAACAAATATTCTTTTGGGATGTTTCAAGATGCTTTCAGGAAGGCAGTTGCTACTGGCAGTTTCGGTGAGAGATACTTCTATTGTCTTTGGTGGGGTATCAGAAATTTAAGCTCATATGGACAGAACTTGGACACCACTGTATTTATTGGGGAAACACTTTTTTCCATCATGCTATGCATTGTTGGATTAGTTCTCTTTGCACTTTTGATTGGAAACATGCAGACATATTTAGAGTCAATGTCAGCAAGACTTGAAGAATGGAGGATTAGGAAGAGAGATACTGAGGAATGGATGAGGCATCGCCAATTACCTCCAGATTTGCAGGAACGTGTCCGTCGCTTTGTTCAATATCAATGGCTTGCAACAAGAGGAGTCGATGAGAAATCCATTCTGCTTTCATTACCTCTGGATCTTCGTCATGAAATTCAACGCCACTTGTGTCTCGCCCTTGTTCGGCGTGTCCCCTTCTTTTCACAGATGGACGATCAACTGCTTGATGCCATTTGTGAACACCTTGTGTCGTCCCTAAGCACTGAAGGCACCTACATTTTTCGGGAGGGTGATCCGGTGAATGAAATGGTGTTCATCATCAGAGGGCAACTAGAGAGCTCCACCACTAATGGTGGAAGATCCGGGTTCTTTAACTCCATTACCCTCAGACCTGGAGATTTTTGCGGCGAGGAACTATTAACATGGGCCTTAATGCCAAACTCTAGCTCAAACCTGCCTTCTTCAACTCGAACCGTTAGGGCTCTTACTGAAGTTGAAGCTTTTGCGTTACAAGCAGATGATCTCAAACGTGTGGCCGCTCAGTTCAAGCGCCTTCACAGTAAGAAACTTCAACATGCTTTTAGGTATTATTCCCATCAATGGAGGGCGTGGGCAGCTTGCTTAATAGAGGCTGCTTGGAGAAAGTATAAGAAACGCAAGGCATCTAGAGATTTATCTCTGAAAGAGGGTCTCTACTATATTACAAGACCAGAGGGAGAAGCTAGTTACAGCGACCTGGTTGATTTGGAGGACTATGATCCTGTGCCCCAGTTGTTCAAGCCTGATGAACCTGATTTCTCTGTGCTATAG 2100 0.4652 MVTIVACVCSFAFVFLPHSFSCDSASPRLIPLSPFSAAESVHPGIRHGRMYRIISTPAHKFRQFGRIQAKPSGATTDEEHAYLILWRHQILDPDSDIVSRWNRIFLITSLVALFIDPLYLYLPFIGGPGCLQTNTELSVIVTLLRSFSDLFYVLHMIMKFRTAFVAPNSRIFGRGELVTDAREIARRYLKSDFVIDLAATLPLPQIVIWLVLPSSSADHAHITLALFVLIQYVPRLFLIFPLNKRIIKTSGVVAKTPWTGAAYNLLLYLLASHVVGATWYLSAIARQLNCWTEECRAENQLQTLSCLITYLDCESLVNPDRQYWLNVTNVVKSCDVKSGDNKYSFGMFQDAFRKAVATGSFGERYFYCLWWGIRNLSSYGQNLDTTVFIGETLFSIMLCIVGLVLFALLIGNMQTYLESMSARLEEWRIRKRDTEEWMRHRQLPPDLQERVRRFVQYQWLATRGVDEKSILLSLPLDLRHEIQRHLCLALVRRVPFFSQMDDQLLDAICEHLVSSLSTEGTYIFREGDPVNEMVFIIRGQLESSTTNGGRSGFFNSITLRPGDFCGEELLTWALMPNSSSNLPSSTRTVRALTEVEAFALQADDLKRVAAQFKRLHSKKLQHAFRYYSHQWRAWAACLIEAAWRKYKKRKASRDLSLKEGLYYITRPEGEASYSDLVDLEDYDPVPQLFKPDEPDFSVL 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1300 699 Gene3D - 104 419 - -
Lele15g1300 699 Gene3D Helix hairpin bin 420 487 - -
Lele15g1300 699 SUPERFAMILY cAMP-binding domain-like 425 621 IPR018490 -
Lele15g1300 699 SMART cnmp_10 496 627 IPR000595 -
Lele15g1300 699 SUPERFAMILY Voltage-gated potassium channels 92 418 - -
Lele15g1300 699 FunFam Cyclic nucleotide-gated ion channel 1 494 612 - -
Lele15g1300 699 ProSiteProfiles cAMP/cGMP binding motif profile. 496 626 IPR000595 -
Lele15g1300 699 PRINTS EAG/ELK/ERG potassium channel family signature 459 466 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g1300 699 PRINTS EAG/ELK/ERG potassium channel family signature 391 402 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g1300 699 PRINTS EAG/ELK/ERG potassium channel family signature 409 418 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g1300 699 PRINTS EAG/ELK/ERG potassium channel family signature 365 382 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g1300 699 PRINTS EAG/ELK/ERG potassium channel family signature 156 165 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele15g1300 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 73 659 - -
Lele15g1300 699 CDD CAP_ED 496 627 IPR000595 -
Lele15g1300 699 Pfam Ion transport protein 100 423 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele15g1300 699 Gene3D Jelly Rolls 494 614 IPR014710 -
Lele15g1300 699 Pfam Cyclic nucleotide-binding domain 519 611 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1300 Lele-ChrLele15 7525488 7528208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1300 82 698 Ion Channels AT5G14870 67.846 0.0 907