Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1297 ATGATGGAACTCACCGATTCCGGCGACGAACTCGGGGACCACAAGCTGCCTCAAGATTCTCGCTCTGGACTCGGAATCGACCTCAATGAGATCCCCTCTCCTTCTTTTGCCGAAACCCTACCGGACTCCATCGACATCGTACGCGCGTACCACGAGAACCCGGCGCCTCCGCCCGGTGGACCGGCGGGGATTCCCGGTGACGTCTGCGGTTCCACTTGTGGTGCCTGTGGCAAGCCCGAGGCGCGGGGTCATGTTGTGGTCTGCGACGGGTGTGAGCGCGGCTACCATTTGGGCTGCGCGGGAATGCGTGGGCGCCAGGCCGTAAACCTTGACGAGTGGGTCTGTGGAGAGTGTGTGTCCAGTGGGGTGAAGAGTAAGCGTTGGCCATTGGGTGTCAAGTCCAAGCATCTTTTGGATATCAATGCTTCGCCGCCCAGCGATGTTGACGGCGAGGGTAGTGAAGAATTGCAGGATTTGAGAAAGCACACTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGTGCCCCGTTGACATATTCAAACTTCTACAATGGTAATGCTATTGGCTTTCAAAAAGCATCTGGAGTTGTTAGAGTGGGTTTTGAGGATGTATTGAACCATACGCAATCAGTGAGTAGAAATTTTGAGGAGGTAGATATGGGGTTGCCTCCTGGAAGACATAGGAATAGTAAAAATACAGCTACTGGCAATCCAGGAGAGATAATTTTGCAAGCTCTCAGAGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGTTGGAAAGTGGAGTTTAGACAAGCTATGAGCAGCTCTGAGTGGTATGCTGTTTACTGTGCACCAGATGGAAAGATTTTTGATTCTGTGTTTGAAGTAGCGTGTTATCTGGGGTTGATGCCTGGCTTCAACTCTCTGGAGTCTGAAATGAGAAATGATAGACCTGTCTCTTCATTAGGCGGGTCTCATTTTACCAGAAAAAGAAAGTCAACTAGACTTCCGGTTGCTAATGGCTTTGCTGAAAGAAGGGAAAGCTTTACCAACAGTTGTTTTAAAGATCCTCCTTCGGATGCTGCAAGTGCAGAGTGTGCTAATGCATGTGGGAGCATATCAGAAGCCACATTAAGTGGAAAGAAAGAGGACGATCACTCTGGCCCTCAGCAATCTGCTGATGGCCTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGAAAGATTGATGATAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGTTGGCATGATAAAATTACAGGCTCCATTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATATTTAGGGTCAGAAGGTGTTCCTGTTCTGATTTTTCAATACCAGTAGGGTCAACCATCCTCTCATTGTCCAACCTTTGTCAATTTGTGAGTCAAACCAATGGAGGTGAGGGAAAGATGATTGATAATATGGAATGTGATGGTGATGATAGTATCCAGATGATCCTAGACGACTCTTGCAATCCAACAGAAAATGATGTCTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACATGATTGCCATACGTTAGATGTATTGCAGTCTGCAGCTGGTCTAGGTCAAGATGAAACTCATAATTTGTCTGATGACTTGGTTTCAATTGGTGAGATAGTGGTGGAAGATTGTTCGTCATCATCAGCATGGAAAGATATTTCCCAAAAATTAATTAATGCTTGCAGTGAAATATTCAAGCAGAAAGGGACTTTAAAGCTCTATTGTAAACATGATGAACGAGAAACATGCGCACATAAATGGGACATCTGGAATGGCGCAAATGAAACAATCCCCATTTCATTTGCTAAATTTTGTGGGTCCCCTGCCCTTGGTATCGCTGCCATGGTTCATGCGCAGAATGATTTTGAAAGTTTGTATGAGGTCTTAAGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTCGAGTTTGTCCAAGAAGTACTTGAACTACTTCCTGGTGTTGAAGGATTCTCACGTTATGAGTTTCTGAATACTAGAAGTAATATCTCTTCTTTGCTAACTGTTGGAAATGGGTTCTTAGTGGCTGATTGGAGAGGCAGATCCCAATATCAGGAAGAAGCGGGACAAGGTTTATATAGGAGACACAAGAAAGTAAAATTGGCCAAAGAACGTATTAAGGAAGATCATTGTCCACCTCCTGGGAAGCCCCTATCCTCTAGGGTTCCTTTTGAACTTGTTGGTGATGTTTTTCAGGCTTGGGAACTATTACGCAGATTTCGTGAAATTTTGGGCTTGAAGGAACCTTTGTTATTGGATGAGCTGGAGAAGGAACTCATCCACCCATGGTTTAATGGATCAGTGATCAGTGAAAAACTTGAGGTTGATGGCAGTGGTGGACCAATATCATCCCCAAACTTGGAAGCTGCTCCTTCAGTTTCTGTTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGCAGCTCAAGTTAACCTTGCATCGTTCACTTACACCAGATGCTTTGGTGCATCTTTGACAAAGGCTCATAATTCCTTGCTGGAGGTTTTAATAGGTGAACTGCAATCCAAAGTGGCTGCCCTAGTGGATCCAAATTTTGATCCTGGAGAGCTGAGAACAAGACGTGGAAGAAGGAAAGACATAGATAGTACTGTTCCTGCCAGACGAGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGGCTCATAGATACATATTAGCTGTCTTATCAATGGATGGTAACCTTGACTCTCAAGAGATTACTGCACGGGAAAGTGGTAAAGTATTTCGCTGCTTACATGGTGATGGTGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCGTTGTTGCTTGCGGAAGCTACAAAGAAAATTTTTGGTTCTGTGAGCAGTGAAAGTGATGTGCTTACCTTTGAAGATGAGGAGTTAGATGCAAAGGATTCTTGTGAGAAAACTTCGTGGAATGATGGTAATATTCCAGAATGGGCACAGCTGCTAGAACCTGTAAGAAAACTACCAACAAATGTGGGAACCAGAATCAGAAAGTGTGTCAATGATGCCTTACTTAAGGATCCACCTGAGTGGGCTAGGAAAATACTGCAACACTCGATTAGTAAGGAAGTGTACAAGGGGAATGCATCTGGACCTACAAAGAAAGCAGTTCTTTCTGTGTTGGCTGATGTATGTGGTGAAGGGTTGCGACAGAAGCCCAATAAAACAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGTCGTATTGTATTACGCCGTGCTGCTGCAGCAGATGATTCCAAGGTTTTTTGCAATTTGCTGGGACGAAAATTGATAAATTCTTCTGATAATGATGATGAAGGGCTTCTTGGATCTCCAGCGATGGTGTCTCGTCCTCTTGACTTCAGGACCATTGACCTGCGACTGGCTGCTGGGGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAACGTTCATATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGACAAATTATCTGAGAATTTCGAATTGTTGTATGATAGTGAGGTTTTAACTTATGTGCAAAGGTTTGGAGAGTATGCCAAATTGGGAAACTTGAATGTGGAAATGAGAAAGGAAGTGGAAACTTTTCTTGCATCAACTAGTGAAATTCCCAAGGCTCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAGTAAACATGCAGTTCAAGATGTTTCACAATGTTCAAAACCTATTGGCAAACCTAGAAGTAAAAAATTCAAGGGGGAGGTTACTTCGCTTTACTTGGAGGCTCTAACTCATCTACTAACTGTAATGGAAGAGAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTATCCTTCTCAAGTTTTTATGTGATGAGTTGCTCAACTCTTCCCTCATACGCCAGCACCTTGAGCAATGTGCTGAGTCATCTGCTGAATCACATCAAAAGTTGCGTGCACTTTCTGCAGAGTGGAAAAGCCTGAAAATTAAAGAAGAAATATTATCGAGTAAAGCTGCAAAAACTGACACATGCTCACTAGCAACTACTGGAGAAGTTGTCCTCAAGGAGAGGCTTACTGGATCACTATCAAATCCTGGTAAAGGCCTGGTTCAGCCACATAGTGCAAGTGACGGTCATTACAATTTTGGGGTATTTGCTGACAGTGTGCATTCGGAAGAGATAAATAAAGAGAAAAATGGGTTTAATAGTGTGGATAAAAGTGTATCTACAACAAATTCAGAGACTGATAGTCAGAGCAGGAATCCCATAAATGTGGAGGGGCAGTTGAAGAGTGTCTGTGCAGCTGTGGATTGCAGTCAGTTGCCTACAAATATGACTTCCTGTGTGGATTCTCAACGTGGTGATAAGCCTAGTAATCCTTTTTCAATGGCAAATAATATGCCTCAAGAAAGTAACAGCTCTGGTGGAGCAGTTCATATGCAGGGTAGCCGGCAGAAATGTGAGGGAAGAGATACATCTCTTGATCTACAGGAACAAGGTGTCCCTTTTGATGTTCCCAAGTCTTCTGTAAATGAATCAGAACAATATCACCTCGAGCTCAATTCTATCAGACATGATATCTCACTTCTGCAAGAGTCAATAACTAGTGTTGGATCACAGCTGCTAAAGCTTTCTGTTCGTCGGGAATTTTTGGGAATTGATTCACTTGGTCGCTTTTACTGGGCTTCAGCAATGCCTGGCGGATGTCCGTGTATACTTGCTGATTCAACTGCTCTGATGTTGCATGGGGGAAGAATCACCAATAGCAGAGACCCTGTGGGCAAGATTTCTGCTACGAAGAATTGTGGACTATCTGGCAAGGAGAGCTATCAGATGTTAGGTCTGATGAAAGATTTATCTCCTTTAATGTCTCTACCAAGTAATACTGTAGGCTGTAATTCACCATGGATTGCTTATCAAACTGATGCTGAAATCGAAGAGCTCTTATGTTGGCTGAAGGATATTGACCCTAGAGAAAGAGAACTTAAAGATTCAATTATGATTTGGCAAAAGTCAAGATGCCAAGAGCTTATTCATATGCAGAATGAAGATCAGGTTGAGCCTCAAGGACTTTGTCCTCTACCTGGGGATAGAGAGAGAATAGTGTCTGATTCTCTTGTTACCAAGGCAACCTCCTTGTTAGAGAAGAAATATGGCCCATTCTTAGAGTTGGGTACCCTTGAGGCGTTGAAGAAGAGGGGTAAAAAGGTAAGAACATCTAATGATGATAAGTTGTATAGGTGCCAATGCCTAGAACCCATATGGCCTTCTAGGCAACACTGCATGTCTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACATAATGATGGCAAATGTAGTGCTGCTTTGCCAGCCTCAGAGAAGAATAAAGATATCAGCGGATCTTCTAAAGGGAGAGGTAATTTGAAATTTGAGACCAACCATGAGAGAGTCAGAGATAATGCAGCAACAGGTGGAACCTCGATGGGTGTAGGTTCTGAGCTGAGCTCAAGATTGATTAAGTTTTCGAATCAAGAATCAACATGTCCGTATAACTTTGAGAATGTCTGTTCTAAGTTTGTGACTGAAGACTCCAACAAGGAACTTATTAAAGAAATAGGTCTTATTGATTCTGATGGGATCCCATCCTTTGTTCCTTCTGTATCTCCGTATGTAAGTGATTCTACAGTTATGCTAATATCAAACAAAAAGGCTGAAAATGTTGCTATTGGGTCCAAGGCTTCTGAACGGCAGATTCCTAAAGGAAGTGAAGGAAATGGCACGTGCAATGACCATATATCAGGCATTCCTATTCGAAGTTCCAGTGTTCATGAAAACAATAAAGCAGGAAAATCAAGGAGATCAACTTTGGGATCTTCAGGGCAAAGGGATGGTAAATCTTTATTTTCTGTTCCTGCTTCACAAGTGGGCACTGACAGCTGCTGTGTGGTACCTCAATCTTCATTGAGACCATTGGTTGGGAAAATTTCACATATTTTGAGGCTACTGAAGATTGGCTTACTTGATATGGATGCTGCGCTACCTGAAGTTGCTTTGAGGCCATCAAAAGCACAGTTGGAAAGAAGACAGGCTTGGCGTTCATTTGTTAAATCTGCAAGGACCATATATGAGATGGTTGAGGCGACTATCACACTGGAGGACATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCCGCTGCCAAATCTTCTACTTTGTCATCCCTAGCCCTTCGAATATACGCCCTTGATTCAGCTATTATATATGAAAAAATGTCAAGTTTTACTGATTGCTCAGAACCTTCTGCGGAAGCAGAACAGAAAGCACCAGCATCTTTGGATACGGAGAAATCCAAAGCAATACGAAAGTCAAGCAGGAAAAGGAAGGAACCAGATGGTTAA 6681 0.4305 MMELTDSGDELGDHKLPQDSRSGLGIDLNEIPSPSFAETLPDSIDIVRAYHENPAPPPGGPAGIPGDVCGSTCGACGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNLDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDVDGEGSEELQDLRKHTQGHNSFSANSFGAPLTYSNFYNGNAIGFQKASGVVRVGFEDVLNHTQSVSRNFEEVDMGLPPGRHRNSKNTATGNPGEIILQALRDFISERHGVLEEGWKVEFRQAMSSSEWYAVYCAPDGKIFDSVFEVACYLGLMPGFNSLESEMRNDRPVSSLGGSHFTRKRKSTRLPVANGFAERRESFTNSCFKDPPSDAASAECANACGSISEATLSGKKEDDHSGPQQSADGLPLQFEDFFVLSLGKIDDRPSYCDANIIWPVGYKSCWHDKITGSIFTCEVLDGGDSGPIFRVRRCSCSDFSIPVGSTILSLSNLCQFVSQTNGGEGKMIDNMECDGDDSIQMILDDSCNPTENDVLSCLESCSSEAHDCHTLDVLQSAAGLGQDETHNLSDDLVSIGEIVVEDCSSSSAWKDISQKLINACSEIFKQKGTLKLYCKHDERETCAHKWDIWNGANETIPISFAKFCGSPALGIAAMVHAQNDFESLYEVLRKWLEQDRFGLDVEFVQEVLELLPGVEGFSRYEFLNTRSNISSLLTVGNGFLVADWRGRSQYQEEAGQGLYRRHKKVKLAKERIKEDHCPPPGKPLSSRVPFELVGDVFQAWELLRRFREILGLKEPLLLDELEKELIHPWFNGSVISEKLEVDGSGGPISSPNLEAAPSVSVESPHAFIQVETEAMKEAAQVNLASFTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPGELRTRRGRRKDIDSTVPARRAKLNMLPINELTWPELAHRYILAVLSMDGNLDSQEITARESGKVFRCLHGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSVSSESDVLTFEDEELDAKDSCEKTSWNDGNIPEWAQLLEPVRKLPTNVGTRIRKCVNDALLKDPPEWARKILQHSISKEVYKGNASGPTKKAVLSVLADVCGEGLRQKPNKTRRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGSHEAFLEDVHELWNNVHIAFGDQPDLVELADKLSENFELLYDSEVLTYVQRFGEYAKLGNLNVEMRKEVETFLASTSEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDSKHAVQDVSQCSKPIGKPRSKKFKGEVTSLYLEALTHLLTVMEEKEYWEYSVGERTILLKFLCDELLNSSLIRQHLEQCAESSAESHQKLRALSAEWKSLKIKEEILSSKAAKTDTCSLATTGEVVLKERLTGSLSNPGKGLVQPHSASDGHYNFGVFADSVHSEEINKEKNGFNSVDKSVSTTNSETDSQSRNPINVEGQLKSVCAAVDCSQLPTNMTSCVDSQRGDKPSNPFSMANNMPQESNSSGGAVHMQGSRQKCEGRDTSLDLQEQGVPFDVPKSSVNESEQYHLELNSIRHDISLLQESITSVGSQLLKLSVRREFLGIDSLGRFYWASAMPGGCPCILADSTALMLHGGRITNSRDPVGKISATKNCGLSGKESYQMLGLMKDLSPLMSLPSNTVGCNSPWIAYQTDAEIEELLCWLKDIDPRERELKDSIMIWQKSRCQELIHMQNEDQVEPQGLCPLPGDRERIVSDSLVTKATSLLEKKYGPFLELGTLEALKKRGKKVRTSNDDKLYRCQCLEPIWPSRQHCMSCHKTLLNDVELEGHNDGKCSAALPASEKNKDISGSSKGRGNLKFETNHERVRDNAATGGTSMGVGSELSSRLIKFSNQESTCPYNFENVCSKFVTEDSNKELIKEIGLIDSDGIPSFVPSVSPYVSDSTVMLISNKKAENVAIGSKASERQIPKGSEGNGTCNDHISGIPIRSSSVHENNKAGKSRRSTLGSSGQRDGKSLFSVPASQVGTDSCCVVPQSSLRPLVGKISHILRLLKIGLLDMDAALPEVALRPSKAQLERRQAWRSFVKSARTIYEMVEATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYALDSAIIYEKMSSFTDCSEPSAEAEQKAPASLDTEKSKAIRKSSRKRKEPDG 2226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1297 2226 MobiDBLite consensus disorder prediction 2203 2226 - -
Lele15g1297 2226 ProSitePatterns Zinc finger PHD-type signature. 73 118 IPR019786 -
Lele15g1297 2226 ProSiteProfiles Bromodomain profile. 1161 1209 IPR001487 GO:0005515
Lele15g1297 2226 ProSiteProfiles Zinc finger PHD-type profile. 1268 1318 IPR019787 -
Lele15g1297 2226 CDD PHD1_Lid2p_like 1270 1315 - -
Lele15g1297 2226 ProSiteProfiles Zinc finger PHD-type profile. 70 121 IPR019787 -
Lele15g1297 2226 PANTHER OS02G0192300 PROTEIN 14 2222 - -
Lele15g1297 2226 SUPERFAMILY Bromodomain 1105 1224 IPR036427 GO:0005515
Lele15g1297 2226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1230 1329 IPR013083 -
Lele15g1297 2226 Gene3D - 252 309 - -
Lele15g1297 2226 SUPERFAMILY FYVE/PHD zinc finger 1256 1322 IPR011011 -
Lele15g1297 2226 SUPERFAMILY FYVE/PHD zinc finger 72 130 IPR011011 -
Lele15g1297 2226 MobiDBLite consensus disorder prediction 1 24 - -
Lele15g1297 2226 MobiDBLite consensus disorder prediction 1537 1570 - -
Lele15g1297 2226 MobiDBLite consensus disorder prediction 2005 2031 - -
Lele15g1297 2226 SUPERFAMILY DNA-binding domain 250 302 IPR016177 GO:0003677
Lele15g1297 2226 Gene3D - 393 502 - -
Lele15g1297 2226 MobiDBLite consensus disorder prediction 1487 1513 - -
Lele15g1297 2226 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1350 1394 IPR028942 -
Lele15g1297 2226 ProSitePatterns Zinc finger PHD-type signature. 1271 1315 IPR019786 -
Lele15g1297 2226 Pfam Bromodomain 1159 1213 IPR001487 GO:0005515
Lele15g1297 2226 Pfam Methyl-CpG binding domain 249 300 IPR001739 GO:0003677
Lele15g1297 2226 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 138 IPR013083 -
Lele15g1297 2226 MobiDBLite consensus disorder prediction 1537 1578 - -
Lele15g1297 2226 Pfam PHD-finger 1270 1316 IPR019787 -
Lele15g1297 2226 Pfam PHD-finger 73 120 IPR019787 -
Lele15g1297 2226 ProSiteProfiles FYR domain FYRN motif profile. 392 445 IPR003888 GO:0005634
Lele15g1297 2226 MobiDBLite consensus disorder prediction 1997 2050 - -
Lele15g1297 2226 CDD Bromodomain 1116 1220 - -
Lele15g1297 2226 MobiDBLite consensus disorder prediction 1491 1513 - -
Lele15g1297 2226 SMART PHD_3 72 119 IPR001965 -
Lele15g1297 2226 SMART PHD_3 1270 1316 IPR001965 -
Lele15g1297 2226 Gene3D - 1112 1229 IPR036427 GO:0005515
Lele15g1297 2226 MobiDBLite consensus disorder prediction 2192 2226 - -
Lele15g1297 2226 CDD PHD_SF 72 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1297 Lele-ChrLele15 7500580 7512123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1297 2 2226 C2H2 Transcription Factor Family AT3G01460 45.667 0.0 1767
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele15g1297 Bromodomain 6.8e-05 No_clan