Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1296 ATGGTTCATCTGTTGGAGAGAAGCTTTGAGGCAGAGAACAAACTGGAGCCAGCAAGGAAGACCCAGTTGGCCAATAAGCTGGGATTGCAGCCAAGGCAGGTTGCTGTGTGGTTTCAGAACCGCAGGGCTAGGTGGAAGACCAAGCAACTTGAAAGGGATTTTGATATTCTCAAGTCTTCCTACGACTCACTCCTTTTAAAATATGAATTCTCTGTGAAGGAGAATGAAAAGCTTAAATCCGAGGCGGTATCACTGAATGAGAAGCTTGAAGCAAAGGATGTACCTAGAGCACCGATATTTGATCAAACTATTGACCCTCTTCCAGTGGATACAGCCCAATTTTCAGCCCTACCATTCAGCACGAGGGTGGAGGATCGTCTGAGCACAGGAAGTGGTGGGAGCTCAGTTGTGGACATGGATAGCTCACAGCTTGTTATGGACAGTGGTGATTCATACTTTCCGGCGGACAGTTATACCAGATACATTACCTGTGTCAATGGGGTTCAGTCAGAGGATGATGACGGGAGTGACGATGGACGGAGCTACTTCTCAGATGTGTTTGTGGCCCCTGGCCAAAACCACGAGGCAGGGGACGGATTGGGTTGTTGCTTGATTGCCGATTTGTATGTGAGGGGAAAGAATAGCAGAACTTCCGGTTCAGTCGAATGTGGTCATCTTTACACGATCGATAAGCTTTCATTACAGAAGCCCTGCGCCATCCTTCGCATTCGAAAGCATATAGCTCGAGTAAAGGGAATTGATGAAAAGCTAACTTTGGATATAACTGGGGAAGAGGCATTGTACTTTCATGGATGGGGAGAAGATGGCAAATCCAGCAATGCCAGGAAAAAAAAGGGGAGTGCCGCAGTCTGTGTTTCTGGACTGAGGATATATAAAGTATACAAATCTCTATAA 915 0.4656 MVHLLERSFEAENKLEPARKTQLANKLGLQPRQVAVWFQNRRARWKTKQLERDFDILKSSYDSLLLKYEFSVKENEKLKSEAVSLNEKLEAKDVPRAPIFDQTIDPLPVDTAQFSALPFSTRVEDRLSTGSGGSSVVDMDSSQLVMDSGDSYFPADSYTRYITCVNGVQSEDDDGSDDGRSYFSDVFVAPGQNHEAGDGLGCCLIADLYVRGKNSRTSGSVECGHLYTIDKLSLQKPCAILRIRKHIARVKGIDEKLTLDITGEEALYFHGWGEDGKSSNARKKKGSAAVCVSGLRIYKVYKSL 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1296 304 SMART HOX_1 1 52 IPR001356 GO:0003677
Lele15g1296 304 FunFam homeobox-leucine zipper protein ATHB-6-like 1 42 - -
Lele15g1296 304 ProSiteProfiles 'Homeobox' domain profile. 1 48 IPR001356 GO:0003677
Lele15g1296 304 Coils Coil 68 88 - -
Lele15g1296 304 Pfam Homeobox associated leucine zipper 48 89 IPR003106 GO:0006355|GO:0043565
Lele15g1296 304 CDD homeodomain 2 49 IPR001356 GO:0003677
Lele15g1296 304 Pfam Homeodomain 3 46 IPR001356 GO:0003677
Lele15g1296 304 Gene3D - 1 46 - -
Lele15g1296 304 ProSitePatterns 'Homeobox' domain signature. 23 46 IPR017970 GO:0000981|GO:0006355
Lele15g1296 304 PRINTS Lambda-repressor HTH signature 19 28 IPR000047 GO:0003677
Lele15g1296 304 PRINTS Lambda-repressor HTH signature 28 44 IPR000047 GO:0003677
Lele15g1296 304 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Lele15g1296 304 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 2 128 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1296 Lele-ChrLele15 7497080 7499841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1296 2 201 Homeobox Transcription Factor Family AT3G01470 53.202 9.53e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele15g1296 Homeodomain 9.3e-15 CL0123