Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1285 ATGGAAACCTGGGGTAATGCAGAGAAGTCGAGAATTATAATGGTCGGGGACACTTTGAAGAAAGCTGGTGATTCATCGCAAAATAGGCTTCCTGAGATTAAGAACGTTGAAGATGCGCAGTTTTGGCAATCTGCATACGCTACTATTCTATACCATAGTGCTTTGTATTTATATTTTCAGTCTTTTGGTCTCGTTAGGAATATTTTAAAGGAGAAGACTAATCCTTTAAGCATGGTTCTTGAGAGGCCCAGATCTCCTTTTTCTATTCATCTGCTGCACAAGATAAATGATTCTGAAGTACAATTCAATAGAGGTCAAGTTCCTATTGCCACGTGGAACAAGACATTATTGGCTACAAATTTACAGCCATCTATTGAAAGTTATGGGAATAGTGTTTTTTCTACCTTCAACTCAGAGTTTCTAACACCAAAAGGAAGCAAGTTATTGGGCAATCCAGATGAACATGTCATCCTCAATGAGGAGATAAAATTCTTTAGTGATGAAGAGTATGATGAAGGAGGGTGGGCTCATGGAAGTTTCCCACTTGAGGAATATGTCAAAGCTTTGGATCGTTCAAAAGGCGAGATGTACTATGATCACTCCCTTGGTATGGGCTATACTAAGATCTCAGAGCAAATATATGAGGGATCATGTATACAAACAGAAACTGATGTGGAAACGCTGTCAAAAGTTGAGGGAGTCACTGCTGTTCTGAACTTCCAAAGTGCAACTGAAGCTGAGATTTGGGGAATCGATTTCAGATCTATTAGTGAATCATGTCAAAGGAATAATATCCTTATGATCAACTATTCTATACGGGCGGGAGATTCTTATGATATGAGGAAGAAATTACTATTTTGTGTGTGGCTTCTCTTGCGGTTGCTGAGGAAAAACCATCGCGTTTTTGTTACATGCACTTCTGGATTTGATCGATCTCCTGCTTGTGTGATTGCATACCTGCACTGGATGACAGATCTTTCCCTTCATGCGGCTTATACATGGGTCACTGGGATGTACACATACAGGCCTGACAGGCCAGCAATTGCCTGGGCAACATGGGATCTTATAGCTATGGTTGAAAAGGGTAACCATGATGGACCCCCTACACATGCTGTCACATTTGTATTGAATGAGATTGAGGTAACAGATCAGCACCAGGGACAGGATGTAACATTGGTGGGAGATTTTACTGGAAATTGGAAAGAACCAATCAAAGCAATACACAAGGGCGGAATAAGATATGAAGCAGAAGTTAAACTTCCTCAAGGAAAGTACTACTACAAGTTTATTATTAATGGAAACTGGAGGCATTCAAATGCTTCACCGGCAGAAAGGGATGAAAGGGGGAACGTCAACAACGTAATTGTGATTGGTGATACTGCTAGTGTTAGGCCTTCCGTTCAACACCAGCCCAAAGATGCCAACGTTGTGAAAGTGATCGAGAGGCCTCCGGATGAAAAAGAGCGGTTTAAGCTGGCGAAAGCTGCTCGCTGCATTGCTTTCAATAGCTTCCGCCCTAATGTTGTCGCTTCTTGTAAAGCTATGAATAATAATCTACGTGCAGGTGTTTCATGTGAAGTGCAACAGGCTGAACTACGTGGTAAAAATGTTTAG 1614 0.4139 METWGNAEKSRIIMVGDTLKKAGDSSQNRLPEIKNVEDAQFWQSAYATILYHSALYLYFQSFGLVRNILKEKTNPLSMVLERPRSPFSIHLLHKINDSEVQFNRGQVPIATWNKTLLATNLQPSIESYGNSVFSTFNSEFLTPKGSKLLGNPDEHVILNEEIKFFSDEEYDEGGWAHGSFPLEEYVKALDRSKGEMYYDHSLGMGYTKISEQIYEGSCIQTETDVETLSKVEGVTAVLNFQSATEAEIWGIDFRSISESCQRNNILMINYSIRAGDSYDMRKKLLFCVWLLLRLLRKNHRVFVTCTSGFDRSPACVIAYLHWMTDLSLHAAYTWVTGMYTYRPDRPAIAWATWDLIAMVEKGNHDGPPTHAVTFVLNEIEVTDQHQGQDVTLVGDFTGNWKEPIKAIHKGGIRYEAEVKLPQGKYYYKFIINGNWRHSNASPAERDERGNVNNVIVIGDTASVRPSVQHQPKDANVVKVIERPPDEKERFKLAKAARCIAFNSFRPNVVASCKAMNNNLRAGVSCEVQQAELRGKNV 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1285 537 Gene3D Immunoglobulins 359 461 IPR013783 -
Lele15g1285 537 SUPERFAMILY E set domains 384 458 IPR014756 -
Lele15g1285 537 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 197 336 IPR029021 -
Lele15g1285 537 Pfam Glycogen recognition site of AMP-activated protein kinase 384 459 IPR032640 -
Lele15g1285 537 CDD DSP_laforin-like 204 350 IPR045204 GO:0019203|GO:0046838
Lele15g1285 537 CDD E_set_AMPKbeta_like_N 372 457 - -
Lele15g1285 537 Gene3D Protein tyrosine phosphatase superfamily 198 469 IPR029021 -
Lele15g1285 537 PANTHER PHOSPHOGLUCAN PHOSPHATASE LSF1, CHLOROPLASTIC 4 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1285 Lele-ChrLele15 7441514 7447121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1285 68 502 Protein tyrosine phosphatase (PTP) family AT3G01510 61.883 0.0 556