Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1281 ATGGCGTCTTCGTCAAGCTACAACTCTCCATGTGCAGCGTGCAAGTTTCTGAGAAGGAAGTGCATGCCAGACTGCATATTTGCGCCCTATTTCCCACCAGAAGAGCCTCAAAAATTTGCAAACGTTCACAAGATATTCGGAGCAAGCAACGTGAGCAAGCTTCTGAACGAAGTGTTGCCTCATCAAAGAGAAGATGCAGTGAATTCTCTGGCCTATGAAGCTGAGGCAAGGATCGAGGATCCAGTGTATGGCTGTGTAGGAGCCATTTCTGTGCTCCAGAGGCAAGTCATAAGACTCCAGAAGGAACTAGACGCCACAAATGCAGAAATGATTCGCTACACTTGCACTGAAATTGCCACTGATGCAACTAGATTATTGGGCAATGAAGGACCTGGAGGTTCGTCGTCTTCTCTTCTTGCTCAATCTCCTTCTGCTTTTTACTATCCTTCTCCTTGGAATAATGATCTCTGTGGGGATGGCTTTCATCACATTCACAGAGGAGGGGCAGATAATAGTAACATGTGA 525 0.4629 MASSSSYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIEDPVYGCVGAISVLQRQVIRLQKELDATNAEMIRYTCTEIATDATRLLGNEGPGGSSSSLLAQSPSAFYYPSPWNNDLCGDGFHHIHRGGADNSNM 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1281 174 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele15g1281 174 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 121 - -
Lele15g1281 174 Coils Coil 89 109 - -
Lele15g1281 174 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1281 Lele-ChrLele15 7410667 7411191 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1281 1 122 AS2 family AT5G63090 82.927 2.77e-70 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele15g1281 LOB 4.7e-42 No_clan