Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1275 ATGGGATCTGGCAATGAGGTTCACTCGATTGGTGAATTCAGTTTAGATGCTCAATGGTTGATAGATCCCAAGCAATTATTTGTTGGGCCAAAAATTGGAGAAGGTGCGCATGCCAAAGTGTACGAAGGAAAATATAGAAATCAGAATGTTGCAGTTAAGATTATTAATAAGGGAGAAACCCCAGAAGAGATCTCAAGGAGAGAGGCACGGTTTGCCAGAGAGGTTGCGATGTTATCAAGGGTTCAACACAAAAATCTTGTTAAGTTTATCGGTGCCTGCAAAGAACCTGTTATGGTTATAGTGACTGAGCTTCTATTAGGTGGAACATTACGCAAATTTCTCTTGAATATGCGGCCGAAGTGCTTGGATATGCATGTAGCAGTTGGATTTGCTCTTGATATTGCTCGAGCAATGGAATGTTTACATTCCCATGGGATCATTCATCGTGATCTTAAACCTGAGAACTTGATCTTGACAGCAGATCATAAAACAGTTAAACTTGCTGATTTTGGTTTAGCCAGAGAAGAGTCATTAACAGAGATGATGACTGCTGAGACCGGGACATATCGCTGGATGGCTCCCGAACTTTACAGCACTGTCACTCTGAGACAAGGTGAGAAGAAGCATTATAATCATAAGGTGGATGCTTATAGTTTTGCAATTGTCTTATGGGAGCTCATCCATAACAAGTTGCCATTTGAAGGCATGTCTAATCTACAAGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCAAGTGCTGAAAACCTTCCTGAGGATTTAGCTCTGATTGTGACTTCATGTTGGAAAGAGGATCCGAATGATCGACCGAATTTTAGTCAAATAATACAGATGCTTCTCCAATATCTCTCCACTATTTCGCCACCAGAGCCCGTGGTTCTCCCACGAATCGCCTCATCTGAGAATGCTGTACTGCCACCGGAATCTCCTGGTACAAGTGCTTTAATGTCCAGAAGAGATGACTCTGGAGAAATCCCAAAAGAAGTTGATATGGAAGACGGGCCTAAAGGTTTTTTCTTCTGCTTTAACCAAACTAGTTTGATTAACGTCAACTCGCGCATTTGGGAAATGATTAGGGGCAAAATGGAGAAAGAAGTAATCTCAAGTCTGAACTCGGAACAACGTTCATCGGCTTGGCTTGGGGAGCAACCGTCGACAAAAGCCCCAATGTCACTCTCTCCGAAGCAAAGCCTCTCTGAGGTTCGGTCAACGGTGGGTCTTTCCGAACCTGTCTCTCACTCGCTTGGTTGCTTGCTCCCCCAAGCAAAAGGAAAGGTTAAATACGCGGAAGCTCCCTCCCTTCCTCCCTCCCTCTCTCTAGAGTCTCGAATGCGATTCTGGTGTCGTCTTCTAGCTCTTCGATAGAGCTGGCTTATTGATGTCGGAGGTTTTGCAAAGAAAGTGAAAAGCAGTTCTCTGCCCTCAGCTGAGCAAATCAAAGACTGTGGGGCATATCGTGAATGTCCAAATTGTCACGGACAAATTGATAATAGTGATGTTTCTCCCGAGTGGCCTGGCTTTCCTGCTGGCGTAAAATTTGATCCTTCTGATACAGAGCTCTTAGAATATTTAGCAGCAAAATGTGGCATTGGAAATGCAGAGCCACACATGTTTATCCACGAGTTCATTCCTACTCTGGAGGGTTCTGAGGGTATTTGCTACACTCATCCAGAAAATCTTCCAGGTGCTAAAAAAGATGGGAGTAGTGTCCATTTTTTTCATAGAACAATTAATGCCTATGCCTGTGGTCAACGAAAGCGTCGAAAGATTCATCATCAGCATGGTGCAACTGAGGAGCATGTGAGGTGGCACAAGACTGGTAAGACCAAATCTGTGATGGAAGATGGCATACACAAAGGTTTTAAAAAGATCATGGTTCTTTATATAAGACCTGAGAAAGGTTCAAAGCCATATAAATCCAACTGGGTGATGCATCAATACCATCTGGGGGCCGAAGAAGAGGAGAAGGAAGGTGAATACGTGGTCTCAAAGGTTTTTTATCAAAAGAAGTCGCTCGAGAAAAATGAGGAGAATCCATTAGTTGAAGAATCAGATAATATGACATCACAAACAAGTCCGAGAACACCAAATCCAAAACCCAGCAATCCACCTCGACCAGGAAATTCTGCTGACTGTGATGATAATTTCGATAAGAAAGTACTTCTGCCATTCAACAGGGATGCCGAGTCTATCCCTCTAGAGCCAAGGGCCCTACCGATTGATGTCCAGGATGAGGATGATACGAATGGCCCTGCATGGTTGGCTGGTGAATCACAGGCTGTTGAAAACTGTGACTTTGATGGCTTGGATGACATATTATTATGCAAGGAGATCTTAGATTCTTCTGATCAATTAAATGATTCTGGAATGAACTCCACCACTGTCAATGGCTTTGCCAGCAACACAAACTTGATAGCCGGAAATGACAATGCAACCTTCGGAATCTCTGACCTGGATAACCTGGAATTGGGTACTCCTCCAGATTTCCAACTTTCTAACTTGCAATTTTGTTCTCAAGACAGTATACTTGACTGGATAGACAGATTATGA 2571 0.4333 MGSGNEVHSIGEFSLDAQWLIDPKQLFVGPKIGEGAHAKVYEGKYRNQNVAVKIINKGETPEEISRREARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKFLLNMRPKCLDMHVAVGFALDIARAMECLHSHGIIHRDLKPENLILTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELIHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEDLALIVTSCWKEDPNDRPNFSQIIQMLLQYLSTISPPEPVVLPRIASSENAVLPPESPGTSALMSRRDDSGEIPKEVDMEDGPKGFFFCFNQTSLINVNSRIWEMIRGKMEKEVISSLNSEQRSSAWLGEQPSTKAPMSLSPKQSLSEVRSTVGLSEPVSHSLGCLLPQAKGKVKYAEAPSLPPSLSLESRMRFWCRLLALRXSWLIDVGGFAKKVKSSSLPSAEQIKDCGAYRECPNCHGQIDNSDVSPEWPGFPAGVKFDPSDTELLEYLAAKCGIGNAEPHMFIHEFIPTLEGSEGICYTHPENLPGAKKDGSSVHFFHRTINAYACGQRKRRKIHHQHGATEEHVRWHKTGKTKSVMEDGIHKGFKKIMVLYIRPEKGSKPYKSNWVMHQYHLGAEEEEKEGEYVVSKVFYQKKSLEKNEENPLVEESDNMTSQTSPRTPNPKPSNPPRPGNSADCDDNFDKKVLLPFNRDAESIPLEPRALPIDVQDEDDTNGPAWLAGESQAVENCDFDGLDDILLCKEILDSSDQLNDSGMNSTTVNGFASNTNLIAGNDNATFGISDLDNLELGTPPDFQLSNLQFCSQDSILDWIDRL 856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1275 856 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1275 856 FunFam serine/threonine-protein kinase HT1 107 307 - -
Lele15g1275 856 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Lele15g1275 856 Gene3D Transferase(Phosphotransferase) domain 1 107 297 - -
Lele15g1275 856 Pfam No apical meristem (NAM) protein 515 656 IPR003441 GO:0003677|GO:0006355
Lele15g1275 856 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Lele15g1275 856 ProSiteProfiles NAC domain profile. 514 675 IPR003441 GO:0003677|GO:0006355
Lele15g1275 856 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 463 783 IPR044799 GO:0003700
Lele15g1275 856 FunFam Kinase suppressor of Ras 1 15 105 - -
Lele15g1275 856 CDD STKc_MAP3K-like 32 286 - -
Lele15g1275 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Lele15g1275 856 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1275 856 Gene3D NAC domain 523 680 IPR036093 GO:0003677|GO:0006355
Lele15g1275 856 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Lele15g1275 856 FunFam NAC domain-containing protein 8 523 679 - -
Lele15g1275 856 SUPERFAMILY Protein kinase-like (PK-like) 18 310 IPR011009 -
Lele15g1275 856 MobiDBLite consensus disorder prediction 683 723 - -
Lele15g1275 856 PRINTS Tyrosine kinase catalytic domain signature 214 236 IPR001245 GO:0004672|GO:0006468
Lele15g1275 856 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Lele15g1275 856 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Lele15g1275 856 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Lele15g1275 856 SUPERFAMILY NAC domain 501 675 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1275 Lele-ChrLele15 7360555 7367635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1275 1 347 MAP Kinase Kinase Kinase AT3G27560 77.401 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele15g1275 PK_Tyr_Ser-Thr 3.7e-57 CL0016
TF NAC Lele15g1275 PK_Tyr_Ser-Thr 3.7e-57 CL0016