LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g1237	ATGGCGATTGAAACTCACAACACATTGAAGAACCTTCCTATCTTATCCCTGACTTCACTCGCAGCGAGCAGAGGCAGAGAGATATCTTCAACCCCATTGCTATCCTTCATCCAGTTGGGCACCGATATTACCTTCCACATTCGTTGCTTTGCCGCCATTGTTGGAGAATTCAAGTGGCCCAAAGTGACAGCAATCTATGAACAAAATAACGGCGTTTTCTATGATCCAAAGATACAAACTCTCTTTTCCCATTCGCTTTACCTTGTTGGTTGTGAGATTGTCCACCATTCTGCTTTTCCCTCTTTGTCTTCTCTATCAAACCCTACAGTTACCATTGGAAAAGAACTTAGCAGGCTCAAGAGCAACAATAACAGGGTCTTCTTGGTTGTTCAAGCTTCTTTAGGGAAGGCGAATCTTCTTTTTGAGAGGGCAAAGCAAATGGGTTTGATGGAGAAAGAATCGGTTTGGGTCGTACCTGAGGTGGTTGCTGGTCTCATTGATTCGGCGAATTCCTCTGCTATTCGTAACATGCAAGATTTGGCATTTTGGTCTCCAGCATTTGGTTTCTCTAAGAACCTTGCCAGACATCAGTTGATGGAGGTGACAAAAAATAATGGTTCTACTGGAAACTCAGAAACAGTTCATGGGCCAGGAAACTTACTTTCAGTTCCCAAGGGTTGGACTTATGGTAATGAGGGGAAAACATTGAGAATAGGTATGCCTGCAAAAGGTGCCTTTACCCATTTTGTGAACGTGACTTATGATCAGAGCGGGAATGAAACTTCCATCACAGGTTTCTCAATTGATGTCTTCAAAGCTGCTGTTAAACGCCTGCCTTATAACTTGCAATATGAATTTATACCAGTCAACTGCTCTTATGATGAAATGGTTCAGCAAGTCTACAAGAAGGAACTTGATGCTGCTGTTGGAGATACAGGAATAATGCATATAGATATCGTTATGTGGTTTGACATCCATGATGACTATCAGTCTGTGTTAGACATCCAAACACTTCAAAGGACAATTGCCGGTGTTGGGTGTAATGGAAATTCATTTATCGTGAGATATTTGACAGAAGTAATAAAATTTAAGCCTAAGAATATTCGGAAAATCGATTCCATAAGTGATTACCCTACAGCCTTTAAGAACAGGGATATTGAAGCAGCTTTCTTTGTTGCACCACATGCTAAAGTCTTCCTTGCCAAGTACTCATGCGCAGGCTTCATCAAAGCAGGGGACACTTTCAAGCTTGGCGGCTTTGGATTTGTGGGTTTGTCTTTTCCTCGTCATTTTGATCCCCTCAGGGTTTGCTTGGGGAAGTGA	1323	0.4218	MAIETHNTLKNLPILSLTSLAASRGREISSTPLLSFIQLGTDITFHIRCFAAIVGEFKWPKVTAIYEQNNGVFYDPKIQTLFSHSLYLVGCEIVHHSAFPSLSSLSNPTVTIGKELSRLKSNNNRVFLVVQASLGKANLLFERAKQMGLMEKESVWVVPEVVAGLIDSANSSAIRNMQDLAFWSPAFGFSKNLARHQLMEVTKNNGSTGNSETVHGPGNLLSVPKGWTYGNEGKTLRIGMPAKGAFTHFVNVTYDQSGNETSITGFSIDVFKAAVKRLPYNLQYEFIPVNCSYDEMVQQVYKKELDAAVGDTGIMHIDIVMWFDIHDDYQSVLDIQTLQRTIAGVGCNGNSFIVRYLTEVIKFKPKNIRKIDSISDYPTAFKNRDIEAAFFVAPHAKVFLAKYSCAGFIKAGDTFKLGGFGFVGLSFPRHFDPLRVCLGK	440

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g1237	440	PANTHER	IONOTROPIC GLUTAMATE RECEPTOR	179	315	-	-
	Lele15g1237	440	Pfam	Receptor family ligand binding region	11	177	IPR001828	-
	Lele15g1237	440	Gene3D	-	230	317	-	-
	Lele15g1237	440	SUPERFAMILY	Periplasmic binding protein-like I	35	180	IPR028082	-
	Lele15g1237	440	SUPERFAMILY	Periplasmic binding protein-like II	218	423	-	-
	Lele15g1237	440	Gene3D	-	43	199	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g1237	Lele-ChrLele15	7166304	7168466	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g1237	178	315	Ion Channels	AT5G11180	40.000	1.23e-25	108