Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1231 ATGGTTTCTGGCTTGAAAGCAAAGAGCAGGAGAAGTGCTAGTGTTAAAATTAATTACCTCATTCATATCGTAGAAATCAAACCTTGGCCCCCGTCACAGTCTCTAAGATCCGTTCGTTCTGTACTTTTACAATGGGAGAATGGTGAACGCTATTCAGGTTCTACCAGTCATGTTGTACCATCGCTGGGTTCTGATACAGATGAAGGAAAAATCGAATTTAACGTGTCGTTTAGACTTCCTGTAACTCTGTTGAGGGATATGTCCATTAGAGGTGGTAAGGCTGATGTATTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAGCCCCGAAGAGATAAGACTCTTAAGGGTCAGTCGCTGGGGACTGCCATCATAGACTTGGCAGATTATGGTATACTTAAGGAGACCTTGAGCATTAGTGCTTCGATGAACTGCAAGAGGAACTACAAAAACACAGGTCAGCCACTTCTATTCATAAAAATTCAGCCTGCTGAAGAGAGTCGCACTAACTCCTTGTCAAGGGACAGTTTGTCAAAAGTGGCGCCAAAGGACGTTAATGGTGGTGACTCAACATTGATGAATGAAGAATACACTGAAGAAGCTGAGATTGCCACTTTTTCTGATGATGATGTTTCTTCACATTCGTCTGTGGCAGCTGTTGCTTCTTCCCTAGAGGCCAATAGGTGTATACCTGCTGAACTTGTTGAGAATGGATCAACTCAAAAGACTGATAGGGGTGACAAGGAGCATCTGGCAAGGCTTGAAAAATCAAATATGATGCCACAAGATACATGCCAAAAGCTGGAGAGGAGTTCATCAAGCACATCATCATTGGATGTATCATCTGATCTCGGGAGTCCGGTAAATGGTCGTGCTTCTTCTAATTCCACTAATTGTAATTCAGTGACCACTCAAAAACGTGCTGTTAGCCCAAATGCTTATTCTTCTTATCCATCTTTGGCTCATGACAAATTAGAGGCAGATTTCAAGATCAAGACTAGAAATGGTGGTAGTAGACATTCAGATGAGGAGATTCATGAAAAGGTTGTTAATCATAGAAATACAGTTACAGATGTTCAAATGTACGGCAAGAATCCAGGTGCTGTAAATTGTGACGTTTCTGAAGTCATTGATAAATTCGATGGGATATATGAGGAAGCTGACAAATATTGTGTGAAGGAGGAAGGAGATGGTAAATTTTACAATAGTTATGTTGAGGACAAACATGGAACTGAAAATTATAGTTTGTATAAGAAAAACAGCACAGAAAATGAAAAATCAGCAGCACTAGGTGCCCAAGATCATGCCCTATTGAGTAGCGGTTCATATCCCTTAGGCGGGGCAAACATTATAAAAGGTGAAAGATTAAAGCATGTAAAGTCAGTGAGGTCACCAGCAGACTCAGCTAGGATTACAGGATCACTGGGTAGTTATCATAATTTGGATGTGAAGGAAATTGGCATTGTTGGAGATGCACAAAACTGTGGAGGAAACATCAGAAGCAACGATAAAAATGATGCTAAAATTTATCCAAGGGAAGCGAGAATGACCATTCTAGACAGCAAAGTTGAGCATTTAGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGTTGCAGCAATTGAGTCTTCTTTATATTCAGTAGTTGCAGAGCATGGAAGCTCCATGAGTAAGGTCCATGCTCCAGCACGGCGTCTTTCTAGGCTGTATCTCCATGCTTGTAAAGAAAACCTTCGAGCAAGAAGGGCTGGGGCAGCCAAAAATGCTGTTTCTGGGCTAGTACTTGTCGCTAAGGCATGTGGAAATGATGTCCCAAGGCTGACATTTTGGTTGTCTAATATCATTGTGTTGAGGACAATTATATGCCATACTTCCAAAGACATGGTACAATCAGTTTCTGCAGATTCTAGTGTAAAAAGGAAAAGTGAAGGAGAGAGGAATGGCAAGACAACACACTCATTACGATGGAAGGGGTCTTCACCTGGTGAAAATGAAAATGCAGCACCAGAACACAGTGGTTTTGGCAACTGGGATGAACTCCATGTGTTCACGTCAGCACTGGAAAAGGTAGAAGCCTGGATATTCTCTCGCATAGTGGAATCTATCTGGTGGCAGACTCTGATTCCACACATGCAACCTGATGCAATAGCCACTAAAAAGGATGTGGACTCTGCCTCAAGGAAAAGCTATAGAAGGATGCCTAGCTCATGTGATCAGGAGCAGGGGAACATTTCACTAGATATTTGGAAGAATGCTTTTAGGGAATCCTGGGATAGGCTCTGTCCCATTCGAGCTGGAGGGCATAAGTGTGGCTGTTTGCCTGTGCTGTCTAGATTGATAATGGAGCAATGTGTGACAAGATTAGACGTGGCTATGTTCAATGCCATTCTTCGTGAATCTGCTGATGAAATCCCTACTGATCCTGTATCTGATCCCATTAGTGATCCCAAGGTTCTCACCGTCCCACCTGGGCAATTGAGCTTTGGAGCTGGGGCACAGCTTAAAACTGCGATTGGGAACTGGTCTAGATGGTTGACTGACTTGTTTGGTATGGATGACGATGATTCATTTGAAGATAAGGACGACCCTGATGACAATGATGGGAGACAAGATACATTCTTGAAGTCCTTCCATCTTCTAAATGCATTAAGTGACCTTCTGATGCTTCCCAAGGATATGCTTTTAAGTTCTACGGTCAGGAGAGAGGTATGCCCAAAGTTTTGCGCACCACTTATCAAGAGGATTCTAGACAATTTTGTTGCAGATGAGTTTTGCCCAGATCCAATCCCCACCGTTGTTTTTGAAGCCCTGGACTCACAGGATGATCTTGACGAGGGTGGTGAGGAGTGCGTTAGAACCTTCCCATGCAATGCAGCTCCAATTGAGTACTTACCTCCTCCGGCAACTTCCATTGTTGCCATTATTGGGGAGATTGGAAGTGAACGTCAACTAAGAAGCAGCAGATCATCTGTTGTGAGGAAGGCTTACACCAGCGATGATGAGCTTGATGAACTAAATTCCCCTTTATCTTCAATCCTAATTGATGCCTCCGCGTCTTCAGTGGCTTCAACAAAACCAAGCTGGAAAAACAAAGAAATTCGCAACGGATCTACTCTCAGATATGAACTACTCAGGGACGTATGGATGAGCAGCGACTAG 3165 0.4284 MVSGLKAKSRRSASVKINYLIHIVEIKPWPPSQSLRSVRSVLLQWENGERYSGSTSHVVPSLGSDTDEGKIEFNVSFRLPVTLLRDMSIRGGKADVFQKNCLEFNLYEPRRDKTLKGQSLGTAIIDLADYGILKETLSISASMNCKRNYKNTGQPLLFIKIQPAEESRTNSLSRDSLSKVAPKDVNGGDSTLMNEEYTEEAEIATFSDDDVSSHSSVAAVASSLEANRCIPAELVENGSTQKTDRGDKEHLARLEKSNMMPQDTCQKLERSSSSTSSLDVSSDLGSPVNGRASSNSTNCNSVTTQKRAVSPNAYSSYPSLAHDKLEADFKIKTRNGGSRHSDEEIHEKVVNHRNTVTDVQMYGKNPGAVNCDVSEVIDKFDGIYEEADKYCVKEEGDGKFYNSYVEDKHGTENYSLYKKNSTENEKSAALGAQDHALLSSGSYPLGGANIIKGERLKHVKSVRSPADSARITGSLGSYHNLDVKEIGIVGDAQNCGGNIRSNDKNDAKIYPREARMTILDSKVEHLENKIKMLEGELREVAAIESSLYSVVAEHGSSMSKVHAPARRLSRLYLHACKENLRARRAGAAKNAVSGLVLVAKACGNDVPRLTFWLSNIIVLRTIICHTSKDMVQSVSADSSVKRKSEGERNGKTTHSLRWKGSSPGENENAAPEHSGFGNWDELHVFTSALEKVEAWIFSRIVESIWWQTLIPHMQPDAIATKKDVDSASRKSYRRMPSSCDQEQGNISLDIWKNAFRESWDRLCPIRAGGHKCGCLPVLSRLIMEQCVTRLDVAMFNAILRESADEIPTDPVSDPISDPKVLTVPPGQLSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSFEDKDDPDDNDGRQDTFLKSFHLLNALSDLLMLPKDMLLSSTVRREVCPKFCAPLIKRILDNFVADEFCPDPIPTVVFEALDSQDDLDEGGEECVRTFPCNAAPIEYLPPPATSIVAIIGEIGSERQLRSSRSSVVRKAYTSDDELDELNSPLSSILIDASASSVASTKPSWKNKEIRNGSTLRYELLRDVWMSSD 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1231 1054 Coils Coil 516 543 - -
Lele15g1231 1054 MobiDBLite consensus disorder prediction 634 673 - -
Lele15g1231 1054 MobiDBLite consensus disorder prediction 640 654 - -
Lele15g1231 1054 MobiDBLite consensus disorder prediction 253 305 - -
Lele15g1231 1054 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 12 134 IPR019448 -
Lele15g1231 1054 MobiDBLite consensus disorder prediction 259 305 - -
Lele15g1231 1054 ProSiteProfiles C2 NT-type domain profile. 7 165 IPR019448 -
Lele15g1231 1054 MobiDBLite consensus disorder prediction 169 191 - -
Lele15g1231 1054 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 513 1051 IPR021827 GO:0005643
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1231 Lele-ChrLele15 7126563 7132026 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0596 07 3401805 3402221 Lele15g1231 15 7126563 7132026 CCT
Lele05g0567 05 3327971 3334711 Lele15g1231 15 7126563 7132026 CCT
Lele13g1228 13 22626901 22632351 Lele15g1231 15 7126563 7132026 hybridization
Lele14g1124 14 20954694 20960018 Lele15g1231 15 7126563 7132026 hybridization