Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1228 ATGCTCCTGGAGACATACACTATTGAAGAGTTGAGGCAAGCAACTGAGGACTTCAATTCAACTAATCAAATCGAGGGACCTGTGTTTCAAGGACGTCTCAATGGGAAGAGCGTGGCAATCAAGCGCACAAACACAGAGACACTGGCAAAGATTGACTTTGGACTCTTCGATGAAGCACTTTACCACCACCCCAACATCCTTAAACTTCTCGGAACGGGCTCAACAGAGGGTCCGGGTCCTGAATCATATCTGGTTTTTGAATTTGCAGAAAATGGATCTCTGAGAGACTGGCTTCACTTTGGGTTGGCCATCAAGAACGAGTTCATTGCTTCCTGCTATTGTTTCCTTTCATGGAGCCAGCGGCTAAGGATCTGCCTTGATGTAGCCATGGGTTTGCAGTATATGCACCACATGATGAAACCAAGCTACGTGCATAGAAACGTGAAGAGCAGAAACATATTTTTAGACGAAGACTTTGGAGCAAAGATAGGGAATTTCGGGATGGCAGGGTGTGTTGAGAATGAAAGAGAGGACCCACTTTCGTATTCAACCAATCCTGCTTCTTGGAGCCTAGGCTATTTGGCCCCTGAATATGTTCCCCAAGGTACAATTTCCCCAAGCATTGATATTTTTGCTTATGGGGTAGTTTTGCTGGAAGTGCTATCAGGTCAAACACCCATAAGCAAGCCCAATGAGAAAGGAGAAGGAAGCATTTGGCTCACAGAGAAATTCAAGTCCATTTTGAAGTCAGAGAATAATGTGGATGAACTAAGGGAATGGATGGACGGTGCATTGGGTGAGAATTACTCATTCGATGCAGCTTTCACCGTGGCAAAACTTGCAAGAGCTTGTGTAGATGAAGACTCCTTTCTCAGGCCAAATGCTGGGGAAGTTGTTGAGAAGCTATCAAGATTGGTTGCAGAATTACCTGAAGAGGAACATTTGTTATTGTCCGAAAGCTCAACCAAACCGCTGGTCAAGACCCCTGCAAACAATCACTGGAAAAAAAATGTATCTTTGGTTTAA 1026 0.4454 MLLETYTIEELRQATEDFNSTNQIEGPVFQGRLNGKSVAIKRTNTETLAKIDFGLFDEALYHHPNILKLLGTGSTEGPGPESYLVFEFAENGSLRDWLHFGLAIKNEFIASCYCFLSWSQRLRICLDVAMGLQYMHHMMKPSYVHRNVKSRNIFLDEDFGAKIGNFGMAGCVENEREDPLSYSTNPASWSLGYLAPEYVPQGTISPSIDIFAYGVVLLEVLSGQTPISKPNEKGEGSIWLTEKFKSILKSENNVDELREWMDGALGENYSFDAAFTVAKLARACVDEDSFLRPNAGEVVEKLSRLVAELPEEEHLLLSESSTKPLVKTPANNHWKKNVSLV 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1228 341 PIRSF ILK 5 320 - -
Lele15g1228 341 Gene3D Phosphorylase Kinase; domain 1 2 88 - -
Lele15g1228 341 ProSiteProfiles Protein kinase domain profile. 1 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1228 341 SUPERFAMILY Protein kinase-like (PK-like) 5 302 IPR011009 -
Lele15g1228 341 FunFam PTI1-like tyrosine-protein kinase 3 89 315 - -
Lele15g1228 341 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 3 309 - -
Lele15g1228 341 Pfam Protein kinase domain 27 300 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1228 341 Gene3D Transferase(Phosphotransferase) domain 1 89 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1228 Lele-ChrLele15 7119321 7120346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1228 2 327 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 45.455 3.69e-92 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele15g1228 Pkinase 5.7e-30 CL0016