Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1224 ATGGGGGATAACTCCAATAATATTGAAGAAACAGTAATGAATCCAAGCCCTGAAGGGGAAGCTGAAGGAGGAGAAGAGAGAGATCCGGAAAGCAATCCCCTGAATGAGCCCCTGCTCAAGAGGAATCGAACACTTTCCACCAATCCTCTTGCTCTTGTCGGAGCCAAAGTTTCCTACATAGAAAGCTTGGACTATGAGATAAATGAGAATGATCTGTTCAAGCATGATTGGAGGAGCAGATCGAGAGTTCAAGTTTTGCAGTACATATTCTGTAAATGGTCGCTGGCTTTCCTTGTTGGACTTCTTACAGGACTTGTGGCCACCCTCATCAATCTTGCAATTGAGAACATTGCCGGTTACAAGATTCTTGCCGTCGTCGGATTCATCGAGAATGACAGGTATTTAGCGGGCTTCTTATATTTCACCGGCGTGAATTTCTTATTAACATTCGTCGCTGCTGTTCTGTGTGTGTGCTTTGCACCCACAGCAGCAGGACCTGGTATCCCTGAAATCAAAGCCTATCTTAATGGCGTCGATACTCCCGACATGTATGGCGCCAAGCCATTGATCGTCAAGATAATTGGAAGCATTGGAGCGGTGGCTGCAGGGCTAGATTTAGGAAAAGAAGGACCATTGGTACATATTGGGGCCTGCATAGCTTCCTTACTAGGCCAAGGAGGCACGGAGAAACACAGGATCAAATGGCGATGGCTTCGATATTTCAACAACGATCGAGACCGGCGAGATCTCATCACATGTGGAGCTTCCTCAGGGGTTTGTGCAGCATTCAGGGCACCTGTTGGAGGAGTTCTGTTTTCTCTAGAAGAGGTGGCAACCTGGTGGAGAAGTGCTCTCCTCTGGAGAACCTTTTTCAGCACAGCCGTGGTGGCGGTAGTGCTCAGGGCCTTCATTGAAGTCTGCAATTCTGGGAAATGTGGCCTCTTTGGAACAGGAGGGTTGGTCATGTTTGATGTCAGCAGTGTCACAGTGAGATACCATGTAATGGATATCATCCCTGTTGTTATCATTGGAATCATTGGTGGGGTATTGGGAAGCCTTTATAACCATCTTCTTCACAAGATCCTCAGAGTCTACAGTATCATCAATCAGAAGGGGAAAATGCACAAGCTCCTGCTCAGTCTCTCAGTTGCGCTCTTCACATCAGTATGCCAATATTGTATACCATTCCTAGCAAGATGCATCCCCTGTGATCCATCGCTTCCAGAAAATGCCTGCCCCACGAATGGACGGTCTGGAAATTTTAAACAGTTCAATTGCCCCAGTGGTCACTACAATGAACTTGCTACTTTGTTGCTTACCACTAATGATGATGCTGTTAGAAACATATTCTCAACGAACACTCCACATGAGTATCATCCATCTTCCCTCCTAATTTTCTTTGCACTCTATTGCATATTAGGACTCATTACTTTTGGGATTGCTGTGCCATCTGGGCTCTTCCTCCCAATAATCCTCATGGGTTCTGGTTATGGCCGTCTTCTTGGCCTCTTGATGGGACCTCACACAAAAATTGACCAGGGGCTGTTTGCTGTTCTGGGTGCAGCCTCCCTCATGGCTGGTTCAATGAGAATGACAGTATCAGTTTGTGTGATCTTCCTTGAACTCACCAACAATCTTCTGCTACTACCCATTACAATGATTGTTCTCCTGATAGCCAAGACAGTTGGGGACAGTTTTAACCCTAGCATCTATGAAATTATTCTACACTTGAAAGGGCTTCCTTTCTTGGACGCAAATCCTGAGCCATGGATGAGAAATCTCACAGTGGGTGAGCTTATTGATGTAAAACCACCGGTGATTACCCTCAATGGAGTAGAGAAGGTGGCTCGTATAGTGGAAGTTCTTAAAAACACTACACATAATGGTTTCCCTGTCGTGGATGAACCAACGGAAGCTTCAAGAGGGGTGGCCAAGCTTCATGGACTGATCCTAAGAGCACACCTTGTGTTAGCGCTAAAGAAGAAATGGTTCGCAAAGGAAAGAAGGAGGACAGAGGAATGGGAAGTGAGAGAAAAATTTACATGGGTGGACATGGCAGACAGAGAAGTGAATATTGAGGAAGTGGCCGTGTCGAGGGAGGAAATGGATTTGTTCGTTGATCTTCATCCTTTCACCAATACGACTCCTTTTACAGTTCTGGAGAGCATATCGGTCGCAAAAGCGATGGTCCTCTTCAGACAACTAGCGCTTCGACATATGCTTGTTTTGCCCGATTATCAACCATCTGGGGTATCTCCTGTAATTGGGATCTTGACCAGGCAGGATCTACTAGCCCACAACATTCTTACAGTCTTTCCTCACCTGAAGAAAATGTGA 2337 0.4596 MGDNSNNIEETVMNPSPEGEAEGGEERDPESNPLNEPLLKRNRTLSTNPLALVGAKVSYIESLDYEINENDLFKHDWRSRSRVQVLQYIFCKWSLAFLVGLLTGLVATLINLAIENIAGYKILAVVGFIENDRYLAGFLYFTGVNFLLTFVAAVLCVCFAPTAAGPGIPEIKAYLNGVDTPDMYGAKPLIVKIIGSIGAVAAGLDLGKEGPLVHIGACIASLLGQGGTEKHRIKWRWLRYFNNDRDRRDLITCGASSGVCAAFRAPVGGVLFSLEEVATWWRSALLWRTFFSTAVVAVVLRAFIEVCNSGKCGLFGTGGLVMFDVSSVTVRYHVMDIIPVVIIGIIGGVLGSLYNHLLHKILRVYSIINQKGKMHKLLLSLSVALFTSVCQYCIPFLARCIPCDPSLPENACPTNGRSGNFKQFNCPSGHYNELATLLLTTNDDAVRNIFSTNTPHEYHPSSLLIFFALYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGLLMGPHTKIDQGLFAVLGAASLMAGSMRMTVSVCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFLDANPEPWMRNLTVGELIDVKPPVITLNGVEKVARIVEVLKNTTHNGFPVVDEPTEASRGVAKLHGLILRAHLVLALKKKWFAKERRRTEEWEVREKFTWVDMADREVNIEEVAVSREEMDLFVDLHPFTNTTPFTVLESISVAKAMVLFRQLALRHMLVLPDYQPSGVSPVIGILTRQDLLAHNILTVFPHLKKM 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1224 778 ProSiteProfiles CBS domain profile. 602 667 IPR000644 -
Lele15g1224 778 CDD ClC_6_like 61 583 - -
Lele15g1224 778 Gene3D Clc chloride channel 84 585 - -
Lele15g1224 778 MobiDBLite consensus disorder prediction 20 34 - -
Lele15g1224 778 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 38 769 - -
Lele15g1224 778 CDD CBS_pair_voltage-gated_CLC_euk_bac 603 766 - -
Lele15g1224 778 PRINTS Plant CLC chloride channel signature 291 301 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g1224 778 PRINTS Plant CLC chloride channel signature 277 285 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g1224 778 PRINTS Plant CLC chloride channel signature 434 450 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g1224 778 PRINTS Plant CLC chloride channel signature 66 74 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g1224 778 PRINTS Plant CLC chloride channel signature 309 316 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lele15g1224 778 PRINTS Chloride channel signature 192 211 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 PRINTS Chloride channel signature 256 275 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 PRINTS Chloride channel signature 514 530 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 PRINTS Chloride channel signature 532 551 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 PRINTS Chloride channel signature 482 502 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 PRINTS Chloride channel signature 570 584 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 PRINTS Chloride channel signature 161 178 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 Pfam Voltage gated chloride channel 149 563 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lele15g1224 778 ProSiteProfiles CBS domain profile. 712 777 IPR000644 -
Lele15g1224 778 SUPERFAMILY Clc chloride channel 70 585 IPR014743 -
Lele15g1224 778 SUPERFAMILY CBS-domain pair 587 765 IPR046342 -
Lele15g1224 778 MobiDBLite consensus disorder prediction 1 38 - -
Lele15g1224 778 Pfam CBS domain 597 660 IPR000644 -
Lele15g1224 778 Pfam CBS domain 714 764 IPR000644 -
Lele15g1224 778 Gene3D - 596 751 IPR046342 -
Lele15g1224 778 SMART cbs_1 715 768 IPR000644 -
Lele15g1224 778 SMART cbs_1 605 660 IPR000644 -
Lele15g1224 778 FunFam Chloride channel ClC3 84 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1224 Lele-ChrLele15 7096795 7100289 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1224 24 777 Ion Channels AT3G27170 76.649 0.0 1201