Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1221 ATGGTGGCGGTGCCTAGGGTGAAATACTCGAGAGAGCCTGACAATCCTACCAAGGCATGCAAAGCCCGAGGTTCAGATCTCAGAGTTCATTTTAAGAACACAAGGGAGACAGCCTTCGCAATTAGGAAGTTGCCCTTGGTAAAGGCTAAAAGGTATCTGGAAGATGTTATTGCTCACAAACAAGCAATTCCCTTTCGACGGTATTGTGGTGGAGTAGGCCGCACTGCTCAAGCCAAAAACCGTCATTCAAATGGCCAAGGACGTTGGCCTGTCAAATCTGCAAAGTTTGTCCTTGATCTGTTGAAAAATGCTGAAAGTAATGCGGAAGTGAAAGGTCTTGATGTAGATGCACTATACGTTTCCCACATTCAGGTAAATCAAGCTCAGAAGCAGAGGCGCCGTACCTACCGTGCTCATGGGAGAATTAACCCATACATGTCATCCCCCTGCCACATTGAGCTGATTTTGTCTGAAAAGGAGGAGCCAGTCAAAAAGGAGCCCGAGACACAGCTGGCGCCCAGGACCAAGAGCTCGTAG 537 0.4823 MVAVPRVKYSREPDNPTKACKARGSDLRVHFKNTRETAFAIRKLPLVKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKNRHSNGQGRWPVKSAKFVLDLLKNAESNAEVKGLDVDALYVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLAPRTKSS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1221 178 Gene3D Ribosomal protein L22/L17 6 178 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele15g1221 178 SUPERFAMILY Ribosomal protein L22 7 159 IPR036394 GO:0003735|GO:0005840|GO:0006412
Lele15g1221 178 FunFam 60S ribosomal protein L17 6 178 - -
Lele15g1221 178 Hamap 50S ribosomal protein L22 [rplV]. 5 159 IPR005721 GO:0003735|GO:0006412|GO:0015934
Lele15g1221 178 PANTHER 60S RIBOSOMAL PROTEIN L17 7 177 IPR005721 GO:0003735|GO:0006412|GO:0015934
Lele15g1221 178 CDD Ribosomal_L22 20 156 IPR001063 GO:0003735|GO:0005840|GO:0006412
Lele15g1221 178 Pfam Ribosomal protein L22p/L17e 22 157 IPR001063 GO:0003735|GO:0005840|GO:0006412
Lele15g1221 178 TIGRFAM uL22_arch_euk: ribosomal protein uL22 9 159 IPR005721 GO:0003735|GO:0006412|GO:0015934
Lele15g1221 178 MobiDBLite consensus disorder prediction 158 178 - -
Lele15g1221 178 ProSitePatterns Ribosomal protein L22 signature. 132 156 IPR018260 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1221 Lele-ChrLele15 7074299 7077293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1221 7 176 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 89.412 8.26e-115 322