Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1208 ATGGAGTGGTCAGTGTGGGATCCACTGAGAGATCAGCCAAACGTTGGTGAAGCCCCGGTGGAGAAATCAGTGTCAGTTGCGGAGACAGAGATGTCGAACTCAAAATCATCATCAAAGAGGAAGCGCGTGTACCATCAATCGCCAGAGAAGGTGAAGTGCTCCGTGGATGGATGCGACTTTGACCTGGGGAATTGCCGGGAGTATCACCGGCGGCACAGGGTATGTCAACCTCACTCCAAGACCTCTTGTGTGTTGGTGAAGGGACTGGAACAGAGATTCTGCCAGCAATGCAGCAGATTTCAATCACTGGATGAGTTTGATGGGTTCAAGCGGAGCTGTAGGAGACGCTTAGAAGGCCATAATAAGCGCAGAAGGAAACCTCGTCATCCACCTCTCTCCTTCTCTGCAGATTACAAAGGACCCAGAATCCTGCAATTTGGGAATCCTGCTAGTGATGATCGTTACATGAGTATGTGGAGCTCTCAACCTGCTGGGAGCTATAATCATTACCCGCCAATTCTGCCAAAGATTGAGATTGAGCAACAGAGTGTGGAAGGTCGTGCCTGTGCCAACAACATAGAGAATATGCAGATGAATTGGTATAATAATCAACGAGTTCCGCCATTAGCAGCGGAACAAGGGGGGATCGGAGATAAGAACCAGAAGATGACTTCGGATTCGGCTCTCTATCTTCTGTCAGCACTTCAGGCACAGAGTTCGTCGGAGTTCAGTATGGTGGAGTCAAGTATAGAGTGTCCAATTCAATCGCAAGCTCCATTTGAAGACGACGATGGAACCCCAAACGGTTCGATTTCAAGGAGTGTGACCAGTGGTTCAAGATTGGGTAAGGATCCTAAAGAAACAAACTTTGATGATCCCAATGGGACGGAGCCCCAGTTGATGGAACACGTCACGTTCCCTTTCTTCTGGGAGTAA 936 0.4882 MEWSVWDPLRDQPNVGEAPVEKSVSVAETEMSNSKSSSKRKRVYHQSPEKVKCSVDGCDFDLGNCREYHRRHRVCQPHSKTSCVLVKGLEQRFCQQCSRFQSLDEFDGFKRSCRRRLEGHNKRRRKPRHPPLSFSADYKGPRILQFGNPASDDRYMSMWSSQPAGSYNHYPPILPKIEIEQQSVEGRACANNIENMQMNWYNNQRVPPLAAEQGGIGDKNQKMTSDSALYLLSALQAQSSSEFSMVESSIECPIQSQAPFEDDDGTPNGSISRSVTSGSRLGKDPKETNFDDPNGTEPQLMEHVTFPFFWE 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1208 311 MobiDBLite consensus disorder prediction 257 283 - -
Lele15g1208 311 MobiDBLite consensus disorder prediction 257 303 - -
Lele15g1208 311 Pfam SBP domain 53 126 IPR004333 GO:0003677
Lele15g1208 311 ProSiteProfiles Zinc finger SBP-type profile. 50 127 IPR004333 GO:0003677
Lele15g1208 311 MobiDBLite consensus disorder prediction 1 43 - -
Lele15g1208 311 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 30 243 IPR044817 GO:0003677
Lele15g1208 311 SUPERFAMILY SBT domain 51 130 IPR036893 GO:0003677|GO:0005634
Lele15g1208 311 Gene3D - 45 114 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1208 Lele-ChrLele15 7019877 7020988 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1208 53 146 SBP-box Gene Family AT5G50670 58.163 2.48e-35 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele15g1208 SBP 1.5e-28 No_clan