LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele15g1207	ATGGAGAATTATACCATGTTGTTCCCTGGTCCTACTTCTTCTTCTTCAAGCAATCAAGTGCCGAGGACTGCCATGGGAGGCTCTTATCATCATGGATTTAGTAACTTTGAGGGCCAAATCTCGAATGGGTTTCTGGGTTTGAGGCATGATGATCACCAAAGCAGTGATTTGCAGAAAACAGGAGAAGTTATTAGAGATGGGCTACTGTTATCTCAGAGCGGGAATGTGAAGGAAGATCATCAGGTGGGTGGTGGTGGTGGTGGTGGTGGTGGTACTGGGAAAAAGAAAGGGGAGAAGAAGGTTAGGAAGCCTAGATTTGCTTTTCAAACTCGGAGCCAGGTTGACATTCTTGATGATGGCTACAGATGGAGAAAATATGGCCAGAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTACTACAGATGTACTCATCAAGGGTGCAACGTGAAGAAGCAAGTTCAACGTCTAACGAAAGACGAAGGCGTAGTGGTGACCACATATGAAGGAGTTCACACACACCCAATTGAGAAGACGACGGACAACTTCGAGCACATTTTAAGTCAGATGCATATATACACTCCCTTTTAA	591	0.445	MENYTMLFPGPTSSSSSNQVPRTAMGGSYHHGFSNFEGQISNGFLGLRHDDHQSSDLQKTGEVIRDGLLLSQSGNVKEDHQVGGGGGGGGGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMHIYTPF	196

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele15g1207	196	SMART	WRKY_cls	117	176	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele15g1207	196	Gene3D	WRKY domain	94	176	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele15g1207	196	MobiDBLite	consensus disorder prediction	72	103	-	-
	Lele15g1207	196	SUPERFAMILY	WRKY DNA-binding domain	109	176	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele15g1207	196	FunFam	WRKY transcription factor 57	103	177	-	-
	Lele15g1207	196	MobiDBLite	consensus disorder prediction	1	23	-	-
	Lele15g1207	196	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	26	179	IPR044810	GO:0003700
	Lele15g1207	196	ProSiteProfiles	WRKY domain profile.	112	177	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele15g1207	196	Pfam	WRKY DNA -binding domain	118	175	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele15g1207	Lele-ChrLele15	7013946	7015357	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele15g1207	105	196	WRKY Transcription Factor Family	AT5G13080	85.870	2.16e-57	176

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele15g1207		WRKY	1.9e-26	CL0274