Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1167 ATGTCCATCTTGCCCTCACAAGCATCAACCTCATCGTCTTCTCAATCTCCGATATCTCCAAACCCTAATCCCCAATATGGAAACCCCTCTCACCGGTCTCATTCTCCTCCATCCGTCTCCTCTCCTTTCCTTCAAGTTCCATCCTTCGGATCTCTCCAGATCTCCGATTCACCATCTCCCGTCGCTATGCCCGACGTCGATTCAGGTCCATCGACTCCAGCTACAGAAGATTCTGCTGGACCTTCCGAAAAGGTGACTGAGTTGGGATCCCCAAATGGTATGAAGAATTCGCCTCACCAAAACTCCAGAGTGGCCCAAAGTCAGTCAAGAAGACGGGCGACTAGATCATCCCAGTCAGCAGGGAAGATGATGGGAACAGTTTATTCTCCTGGAGATCAGCAAAATACTAGGTATTTAAATCCTCATGGGAGCACCCCTTCTGCAGGAAGAAAATCTCAGATGGTTAATGGTAATCACTTGCTGAACTTTCATTATGATCCCATATCTCGTCCTCAAGCAAGGGGTCCTCCTCCACCACCACCAAGAAGGAAGCAGAAGAAAAGGCCATACAACAAAGATTTATTTTTACAGGCAAATTACAAATTCGTGGTGTTGGATTCAGGAGACTATTCACCGGAGTCTTTGGACCCAGATAAAATGCTACAGTGGGAAGATATTGTATGTGTGAGGTATTCCACTCCATTCTTGGTTCAGTGTCCAATTTGTTTGGAGTATCCTCTTTGTCCACAAATAACCTCATGTGGACATATTTTTTGTTTCCCTTGTATCTTACAATATTTGATGATGGGTGAAGAGGATCAAAAAGGTGATTGCTGGAAAAGGTGTCCCTTATGTTTTGTCATGATATCTGCAAAGGATTTATATACCATCTACATTGAAAATGTTAAGCAGTATCAAGTGGGAGATACCATCGAGTTCAGACTTCTAACTAGGAAAAAGGGCTCTTTTACTCTGTCTGATAAAAATAAGGAGATGGATGTCTTATCATGTGAGGATAACAATTTATGTGACCCATTTTCTAAGTTCACACTCACATCAGATGTAGATCTCTCAGTGAGACAGGCAATATCGGATCTAGATGGTTGGCTAGCTAAAGCTGATTCTGGTCTTGTTGATGACTTGGAGAAACTTCCATATGTTTGTGCTGCAATGCAACAATTAGAACAGAGGAAGAAGTATTGGAATGAGCACAGGGCTTGTGATGTTGGAAAATCCTCGAGGCTTATTGATTGTGGATATCACAAACCATCAACAGTTGTAAATGGCACTGATTTTTATGATGAGACCCGGTATTATGGATCAGGACCTTCCTCTACAGATTTCCCCGACCAAAGCAAGGGTATAATAATGGATAATTCAAATGCAAGAGACTGTCCAGATCAAACGATGGGTGTTGAGAGAAAAGTATTAGATCTAGAAATTAATCCATCTTCTTTCTATGAGGAGAAAACTGATATTCAAAGGCATCCAAATGGTTCAAAGGAGAGTGACTCGTACAATTTTTACCAGGCTGCTGATGGTCAGCATCTCATTCTGCATCCCCTAAACATGAAGTGTCTACTTCACCATTATGGAAGCTATGATATGCTTCCACACAGAATAAGTGGAAGGATTATGCAATTGGAAACAGTCACTCAGTCAGAGGCAATGAGGAGGCGGTACCGATATTTGAGTCATTTTCCTTTAACGGCGACATTTCAGCTTTGTGAAATTGATTTGAGTGAGATGCTGCCTTCTGAATCCCTGGCCCCATTCATGGATGAACTGAAGAAGCGTGCAAACCAGAGGAGGCAACTTGGAAAGAAGGAACGAAAAGAGAAAATCAAGGCTGAAGCTGCTTCTATGCATTGTATTCCTATACCAACCAGTTCTCAGCTGATGTCTCGTGACAATTCTCCACCATTCTCCATGGATGATTTTGAAGCTCTGGGGAATTCGACTGTATCATCAAGTCCTCCTGTTGTTGGGGGGAGAAGTTTGTTTTCAAATGTTACGAGACTTGGTTTTGCTGCTGGTCATGATTCCCCATCCTTGAACATTGAAGAAACTAATGGTCTACATTATCATAATGTGGCAACTGATTCTTCTGGCTTGACAGGTCTGAGGAATGTGGAGACATCATCATTTGCCAATGTTATATCTAGAGAAGAGTCTCTCAATAGCGTAAATGCACCCAAGACAAGTGACTTGGGTAAGAAGGGGAAGAAACCAACTAGAGTTCTTCTTTCAACAGCAGGGGGCAGGCGTTACTGA 2274 0.4261 MSILPSQASTSSSSQSPISPNPNPQYGNPSHRSHSPPSVSSPFLQVPSFGSLQISDSPSPVAMPDVDSGPSTPATEDSAGPSEKVTELGSPNGMKNSPHQNSRVAQSQSRRRATRSSQSAGKMMGTVYSPGDQQNTRYLNPHGSTPSAGRKSQMVNGNHLLNFHYDPISRPQARGPPPPPPRRKQKKRPYNKDLFLQANYKFVVLDSGDYSPESLDPDKMLQWEDIVCVRYSTPFLVQCPICLEYPLCPQITSCGHIFCFPCILQYLMMGEEDQKGDCWKRCPLCFVMISAKDLYTIYIENVKQYQVGDTIEFRLLTRKKGSFTLSDKNKEMDVLSCEDNNLCDPFSKFTLTSDVDLSVRQAISDLDGWLAKADSGLVDDLEKLPYVCAAMQQLEQRKKYWNEHRACDVGKSSRLIDCGYHKPSTVVNGTDFYDETRYYGSGPSSTDFPDQSKGIIMDNSNARDCPDQTMGVERKVLDLEINPSSFYEEKTDIQRHPNGSKESDSYNFYQAADGQHLILHPLNMKCLLHHYGSYDMLPHRISGRIMQLETVTQSEAMRRRYRYLSHFPLTATFQLCEIDLSEMLPSESLAPFMDELKKRANQRRQLGKKERKEKIKAEAASMHCIPIPTSSQLMSRDNSPPFSMDDFEALGNSTVSSSPPVVGGRSLFSNVTRLGFAAGHDSPSLNIEETNGLHYHNVATDSSGLTGLRNVETSSFANVISREESLNSVNAPKTSDLGKKGKKPTRVLLSTAGGRRY 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1167 757 ProSitePatterns Zinc finger RING-type signature. 254 263 IPR017907 -
Lele15g1167 757 MobiDBLite consensus disorder prediction 1 190 - -
Lele15g1167 757 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 233 300 IPR013083 -
Lele15g1167 757 FunFam RING finger protein 10 232 300 - -
Lele15g1167 757 SUPERFAMILY RING/U-box 238 291 - -
Lele15g1167 757 MobiDBLite consensus disorder prediction 89 159 - -
Lele15g1167 757 ProSiteProfiles Zinc finger RING-type profile. 239 285 IPR001841 -
Lele15g1167 757 PANTHER RING FINGER 10 FAMILY MEMBER 67 757 IPR039739 -
Lele15g1167 757 SMART ring_2 239 285 IPR001841 -
Lele15g1167 757 MobiDBLite consensus disorder prediction 1 58 - -
Lele15g1167 757 CDD RING-HC_RNF10 239 286 - -
Lele15g1167 757 Pfam Zinc finger, C3HC4 type (RING finger) 239 285 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1167 Lele-ChrLele15 6757123 6761942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1167 148 691 C3H Transcription Factor Family AT3G26730 56.866 0.0 627