Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1163 ATGCAGCAGAATGTTTTGAATCAATCTTGCGTTGGAGGTTGTGGCTTGTGGATGGCAGGGATTGAATCACGCCTTCATCGCATGCGTCTTCTTGCAATTGTGTACGTTCTCATTTCGAGTTCATGTGCTAGATTTCGGACCAACTTCTATGGGGTGCAACCGCTGAACCGTGTTAGTCCGAATCAGAGTCCTACTGCTAACAGTGATCTGGGTGCTGGAATGGGGCGTCGTCATTCTGTGGTTTCGACCCCCAAGCTTAATATTGTACCGAATGGTCATAAATGTGACAAGACTGAGGAACCAAATGGTTCAAACAATTCGTCAATTCAGAGAAGAACAAGTCCTCGATTACAAGTTAAGCAAAAAGTGGATACGGAACTTCCAGTGTGCCGCAGAGATGAGCTGCTCGACAAAGCTAGCGATGCAAAGATGAGTACCTGTAAAACAAACGTTAACGACGAAAATGTGGATAAGCAACAGTTAGTTGGAGGACCAAAGAGAACTAAAAATATGGATAACTCAACAACTAAGAAACCACAAGAGTCTAAGGAGTCTTTAATACAGAGAAGGACTAGCCCTCGAATCCAAGCCAAACAAAAGGTGGATAAGACACTTCCAGTGTCCAGTAGGGTGCAGTTGTCCGGTGATCGAGACGATGCCAGTGATGTGAAGAAGAGTACAACTCGCAAAAGAAGTCGCAGTGACTTAAATGTGCGTAAGGAAAGTGTTGTGGAGGACCAACTGAAAGCTAACAAATTGAATGAGTCAATTACTGAAGAGCCAAATGAGGACAATGAATCGTCAGCTCAAAGGATTTCTAACTCTAGGGTTCAAAATAAGGAATTTCTAGTGCGTCGTAGAGTAGAGTTGTTAGAGGACCGGGATAATGCTGGTGATGATAAGAAAAGCAACTGTTTCAAAAGAAAGGTCAATGATGAAATTGGGGATGAACATGGGGGCAAGGAAGGGGGAGTAGGTAAGCCAACTAGAGTAAAGACGCTTAAAGAGGCTACCTTGGTTCATAACAAACAGACATCTGCGGGTTCGAAAGCAAATGGAGCAGGGAATTTGACAGATAAAAGTGATTTTGTCAAGGTGAAAGAAACGTTGAGGTTGTTTAACAGGCATTATCTTCATTTTGTTCAGGAGGAGGAGAAGAGGTGTAACAAAGTGGAATCTTCCCGCAAAGCGTCTAAAGGAGGTTCAAAATCTAAGGAGGAGGAGAAGAGGCGTAACAAAGTGGAATCTTCCGTCAAAGCGTCTAAAGGAGGTTCAAAATCTAAGAAAAATGCAACGGTTGAAGTTAAAAAGAATATGGCTAAGCGACCTGATTTGAAAGCATTATCCAAGATGTTGGAAAATAAGGAGACACTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGTGCTGAAATGGTTGCGGTTGGGTTTCATAGCCACTGGCTAAATGGAATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTTCAGTCACTATGAATTTCCAATTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGGTGATCTTGATAATGCTGAGGACATTGTATATACTGGTCAAGGTGGCCATAATTTGATCGGTGATAATGGTCAAATTCAGGATCAGGTGTTAAAGCGGGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTATCTGTAAGGGTGGTTCGTGGACATGAATCTTCAAGCAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAACTATTGGGCAGAAAAAGGATTATCTGGGTTTACAGTCTACAAGTTTCGGCTGAGGAGGCTTGATGGGCAACCAACCTTGACAACTAACCAGGTGTATTTCATTAATGGACGTGCTCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCGAAGGTGAAGAGGATGTGCCTATTCCTGCCACTAACCTGATTGATGAACCCCCAGTTGCACCCACAGGTTTTAAATATAAAAAATCAATTTTGCTTTCAAAGAATGTAAAGCTCCCCCCAGCTGTCACTGGATGCAAGTGCAAAGGTTCATGTGTGGATCCGACATCCTGTGAATGTGCTTTACGAAATGGATATGATTTTCCCTATGTATTTCGTAATGGAGGGAGGTTAGTTGAAGCCAAAGATATTGTCTTTGAATGTGGGCCAAACTGTGGATGTGGTCCTGGTTGTGTTAATCGAACCTCTCAAAGAGGACCAAGATATCGCCTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCCGTTAGATCTTGGGATTTTATGCCTTCTGGAGCACCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGAAGATGTAGAGAATACACTAGAGAACAACTATATTTTTGAGATTGATTGTTTGCAAACGATGAAGGGCATTGGTGGAAGAGAGAGGCGATCACAAAATGAAACATCTACAGCAGTCAAGCTCTTGGACAATTATGCAGATGATAATTCTGAATCCGCACCAGAGTTTTGTATTGATGCTGGATCAACTGGAAATATTGCTCGATTCATAAACCATAGTTGCGAACCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGCTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAAGTAAAGAAAATGATGTGTTTTTGTGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2832 0.4241 MQQNVLNQSCVGGCGLWMAGIESRLHRMRLLAIVYVLISSSCARFRTNFYGVQPLNRVSPNQSPTANSDLGAGMGRRHSVVSTPKLNIVPNGHKCDKTEEPNGSNNSSIQRRTSPRLQVKQKVDTELPVCRRDELLDKASDAKMSTCKTNVNDENVDKQQLVGGPKRTKNMDNSTTKKPQESKESLIQRRTSPRIQAKQKVDKTLPVSSRVQLSGDRDDASDVKKSTTRKRSRSDLNVRKESVVEDQLKANKLNESITEEPNEDNESSAQRISNSRVQNKEFLVRRRVELLEDRDNAGDDKKSNCFKRKVNDEIGDEHGGKEGGVGKPTRVKTLKEATLVHNKQTSAGSKANGAGNLTDKSDFVKVKETLRLFNRHYLHFVQEEEKRCNKVESSRKASKGGSKSKEEEKRRNKVESSVKASKGGSKSKKNATVEVKKNMAKRPDLKALSKMLENKETLYPEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQAYSKVSQFSHYEFPIAVAIVLSGMYEGDLDNAEDIVYTGQGGHNLIGDNGQIQDQVLKRGNLALKNCMEQCVSVRVVRGHESSSSYSGKVYTYDGLYKVVNYWAEKGLSGFTVYKFRLRRLDGQPTLTTNQVYFINGRAPQSIAEIRGLVCEDITEGEEDVPIPATNLIDEPPVAPTGFKYKKSILLSKNVKLPPAVTGCKCKGSCVDPTSCECALRNGYDFPYVFRNGGRLVEAKDIVFECGPNCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDFMPSGAPVCEYTGLIRRTEDVENTLENNYIFEIDCLQTMKGIGGRERRSQNETSTAVKLLDNYADDNSESAPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMMCFCGAADCRKRLF 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1163 943 Pfam SET domain 774 913 IPR001214 GO:0005515
Lele15g1163 943 ProSiteProfiles Post-SET domain profile. 927 943 IPR003616 -
Lele15g1163 943 MobiDBLite consensus disorder prediction 101 116 - -
Lele15g1163 943 SMART set_7 763 919 IPR001214 GO:0005515
Lele15g1163 943 Gene3D SET domain 644 943 IPR046341 -
Lele15g1163 943 MobiDBLite consensus disorder prediction 384 439 - -
Lele15g1163 943 SMART preset_2 651 747 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele15g1163 943 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 127 943 IPR025794 GO:0016571
Lele15g1163 943 ProSiteProfiles YDG domain profile. 465 620 IPR003105 -
Lele15g1163 943 MobiDBLite consensus disorder prediction 57 124 - -
Lele15g1163 943 Pfam Pre-SET motif 654 755 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele15g1163 943 SUPERFAMILY SET domain 648 920 IPR046341 -
Lele15g1163 943 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 169 936 - -
Lele15g1163 943 Gene3D - 448 636 IPR036987 -
Lele15g1163 943 ProSiteProfiles Pre-SET domain profile. 698 760 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele15g1163 943 SUPERFAMILY PUA domain-like 447 633 IPR015947 -
Lele15g1163 943 MobiDBLite consensus disorder prediction 150 274 - -
Lele15g1163 943 MobiDBLite consensus disorder prediction 171 188 - -
Lele15g1163 943 SMART G9a_1 460 624 IPR003105 -
Lele15g1163 943 MobiDBLite consensus disorder prediction 215 259 - -
Lele15g1163 943 Pfam SAD/SRA domain 464 624 IPR003105 -
Lele15g1163 943 ProSiteProfiles SET domain profile. 763 913 IPR001214 GO:0005515
Lele15g1163 943 MobiDBLite consensus disorder prediction 384 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1163 Lele-ChrLele15 6731275 6744079 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1163 451 943 EF-hand Containing Proteins AT5G13960 64.980 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele15g1163 SAD_SRA 1.3e-47 CL0178