Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1160 ATGGACAACAGGACAAACACCCCAATTAGAAAAGGAAAGGGAAGAAGGAAGGAGCATGATATATATATAAAGCGTAAAAAGTTACAGGAGAGAAGAAGAAGAAGAAGAAGAATTGAAGCAGCGAGAAAGTTAAAGAAAGAATTAAACAAGGTGGATCGAAGGTATGGAAAGAGGCCTTTCTCTTCTGATGAAGCATCGGAGGAGGAAAAAAAGCAAGATTTCTTCATTCCTTCTAGATTCACATCGCTATCTCAGACCCAAACACAAGACAATTATGCCTCTCCCTTTCCCTATGTTATCAGTTCCACTAGTACCACCACCTTCCCAATCCCACAAGTAACAACCTCTTCTGCTTTGATTGAGACTCAGATCAGCTCATCTCCGAATCTACCTCAAGGGAATATTATAGAAAGGAAAAAACATTATAGAGGAGTTAGGCAGAGACCGTGGGGGAAATGGGCAGCCGAAATCCGAGACCCAAACAAAGCAGCAAGAGTGTGGCTTGGCACGTTTGACACGGCAGAGGATGCTGCAGCTGCTTATGATGCTGCAGCTTTGAAGTTCAAAGGCAATAAAGCCAAGCTCAATTTCCCTGAACGTGTAGCTAATTTTCAAGCTCTTGCTCCTCCTCCTCCTCGGCGGCCTCCTCCATCTGAGGCGGCGCCGCTGCCGGATTCTTCTCAACCACCATGGCCACCTCCTCCGTCAGGCGAGGGGTTCCCAAACCTAATGCAGTACGCTCAGGTGCTTTGTAGTAGGGATGATGATGATCTACAACGAGCTGCTTCTGGTCTTTATAGTTATCATCAGAGTGTTAATGAGTCATTTCTTTATGATTCTTCTTCATACTTCTCGTCGTCATCGGCGGTGACTTCGTCTTCTTCCACTACGGCTGGGTCTGATCAATTTCATGGACAAATAATGGGAGATCGTGGCTTTTCGGGTTCTTATTATTTTCTTGATAAGGGGACTGATGATTTCGATGGAAGCCACACGAGGTGA 1002 0.4531 MDNRTNTPIRKGKGRRKEHDIYIKRKKLQERRRRRRRIEAARKLKKELNKVDRRYGKRPFSSDEASEEEKKQDFFIPSRFTSLSQTQTQDNYASPFPYVISSTSTTTFPIPQVTTSSALIETQISSSPNLPQGNIIERKKHYRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEDAAAAYDAAALKFKGNKAKLNFPERVANFQALAPPPPRRPPPSEAAPLPDSSQPPWPPPPSGEGFPNLMQYAQVLCSRDDDDLQRAASGLYSYHQSVNESFLYDSSSYFSSSSAVTSSSSTTAGSDQFHGQIMGDRGFSGSYYFLDKGTDDFDGSHTR 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1160 333 MobiDBLite consensus disorder prediction 208 239 - -
Lele15g1160 333 MobiDBLite consensus disorder prediction 42 71 - -
Lele15g1160 333 Pfam AP2 domain 141 190 IPR001471 GO:0003700|GO:0006355
Lele15g1160 333 SUPERFAMILY DNA-binding domain 141 199 IPR016177 GO:0003677
Lele15g1160 333 MobiDBLite consensus disorder prediction 205 239 - -
Lele15g1160 333 FunFam Ethylene-responsive transcription factor 2 140 199 - -
Lele15g1160 333 MobiDBLite consensus disorder prediction 17 41 - -
Lele15g1160 333 ProSiteProfiles AP2/ERF domain profile. 141 198 IPR001471 GO:0003700|GO:0006355
Lele15g1160 333 MobiDBLite consensus disorder prediction 1 71 - -
Lele15g1160 333 Gene3D AP2/ERF domain 140 200 IPR036955 GO:0003700|GO:0006355
Lele15g1160 333 MobiDBLite consensus disorder prediction 1 16 - -
Lele15g1160 333 PRINTS Ethylene responsive element binding protein signature 142 153 IPR001471 GO:0003700|GO:0006355
Lele15g1160 333 PRINTS Ethylene responsive element binding protein signature 164 180 IPR001471 GO:0003700|GO:0006355
Lele15g1160 333 SMART rav1_2 141 204 IPR001471 GO:0003700|GO:0006355
Lele15g1160 333 PANTHER DNA-BINDING DOMAIN 73 279 IPR044808 GO:0003700|GO:0009873
Lele15g1160 333 CDD AP2 140 199 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1160 Lele-ChrLele15 6720582 6722710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1160 138 266 AP2-EREBP Transcription Factor Family AT5G13330 52.941 7.47e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele15g1160 AP2 3e-15 CL0081