Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1157 ATGTGGGATTGCAGGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATAATTATACTACTGATATGGTTCTGCTTATTTCACAAGAGCGGTGTTTCTAGAAATTCAGAGACAGGGTCTTCTGATCCTTCACAAGTGGGAAGACATGGTGGGATAGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTTTCTCAGGCTACAAAAAATTTCAATGACAAGAATCAGATTGGAGAAGGCAAATTTGGGGAGGTTTACAGGGGTTTACTTCATGAAGGAATTCTTGTAGCCATAAAAAAGCGCCATGGATCCCCTAGTCAGGAGTTTGTAGATGAGGTACACTTCCTCTCATCGATTCAACACCGAAATATTGTAGCTCTTTTGGGATACTGCCAGGAAAACAACCTACAGTTCCTCATATATGAATACGTTCCTAATGGGAGCGTCTCCAGTCACTTGTATGGAGCTGGTCAACAATCACGTGAGAAGCTAGAATTCAAGCATAGACTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTGAGTCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAACGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCCGATGCAGGGCTTCGCAACTTCCTAGGAAGAGTTGAAATCGCAGGGCCATCTTCTCAAGTTTCAGTAGATGAAATCTTCCTTGCTCCCGAAGTGAGAGAATTCAGAAGATTTTCTGAAAAGAGTGATGTGTACAGTTTTGGGGTGTTTTTGCTGGAACTGTTAAGCGGCAGGGAAGCAACTGAATCACCATCTTCAAACTCAAATCAGAACCTAGTTGAATGGGTGCAAAGTAAGCAACAACCTGGGATTATGTCAAACATAGTTGATGAAAGAATGGGAGGCAATTATACGGCAGAAGGCATGGAAGAGTTTATGGCACTGATAGTTCCATGTATTGATACTTCAAGTGAGAGACGACCAACAATGAGCTATGTGGTGATGGAAATGGATCGAATTCTTGAGAAAGAAAGGAACTTGACAACAGTGATGGGAGAAGGAACCCCAATTGTGACCCTTGGAAGCCAATTATTTAAAGCTTCAAAATAA 1146 0.4258 MWDCRNLAATVGGAAGAVALVGIIILLIWFCLFHKSGVSRNSETGSSDPSQVGRHGGIELTVRDARRFEIEELSQATKNFNDKNQIGEGKFGEVYRGLLHEGILVAIKKRHGSPSQEFVDEVHFLSSIQHRNIVALLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNFLGRVEIAGPSSQVSVDEIFLAPEVREFRRFSEKSDVYSFGVFLLELLSGREATESPSSNSNQNLVEWVQSKQQPGIMSNIVDERMGGNYTAEGMEEFMALIVPCIDTSSERRPTMSYVVMEMDRILEKERNLTTVMGEGTPIVTLGSQLFKASK 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1157 381 Gene3D Transferase(Phosphotransferase) domain 1 153 367 - -
Lele15g1157 381 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Lele15g1157 381 SUPERFAMILY Protein kinase-like (PK-like) 61 347 IPR011009 -
Lele15g1157 381 Gene3D Phosphorylase Kinase; domain 1 52 152 - -
Lele15g1157 381 FunFam Protein kinase superfamily protein 45 152 - -
Lele15g1157 381 FunFam Protein kinase superfamily protein 153 366 - -
Lele15g1157 381 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 16 356 - -
Lele15g1157 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Lele15g1157 381 ProSiteProfiles Protein kinase domain profile. 80 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g1157 381 Pfam Protein tyrosine and serine/threonine kinase 83 348 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1157 Lele-ChrLele15 6700607 6702873 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1157 6 375 Receptor kinase-like Gene Family AT3G46290 34.860 2.50e-63 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele15g1157 PK_Tyr_Ser-Thr 9e-44 CL0016