Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1141 ATGGATTCCCTTGACAGCGATCAGAAATGCCCATTACAAAGTTCAGCGCTGGCAACTGACGGTGATGCACCTACTGATGCAGGAGATGATGTCAAATTGAGGTCTAGGGACCAAAGAGAAGCTCTACCAGGTGAGCCGAAGTGTGTTATATGTGGCCGCTATGGTGAGTACATATGTGATGAAACTGATGATGATGTTTGCAGCTTGGAATGTAAACAGAAACTACTACAAAGAACTGCCTGCCCCTCATTGCCTGCTGTTACTCGTTCATCTAAAATGCTTCCTGCAACTGATGAGTGCTTTTATGTTAGAGATAATGACTATGCATCAGGTACTCAGTCCAGAAATGAGGTTGATATGCTTAGAAAGAAACTTGACATTCATGTGAAGGGTGATGTAGTAGCACCAATATTATCGTTCAGTAGTTGTAACCTTCCCGATAAGCTCCTCCACAATATAGAAGCCGCAGGATATGACATGCCTACACCTGTCCAGATGCAGGCAATCCCAGCTGCTTTGACGGGAAAAAGCATGCTTGTTTTGGCTGATACAGGATCTGGAAAGTCTGCTTCATTTTTAATTCCAGTGGTGTCTCATTGTGCAAGGCATCGCCTTGAGCATGCCTCTGATAAGAAGATGCCATTAGCTATGGTGTTAACACCTACGAGAGAGCTCTGTATTCAGGTTGAAGAGCATGCTAAATTGCTTGGAAAGGGATTGCCTTTTAAAACTGCACTTGTGGTTGGTGGTGATGCCATGGCTGGACAGATCTATCGCATTCAGCAAGGAGTAGAATTGATTGTAGGAACTCCAGGAAGGCTGGTTGATCTTTTAACAAAGCATGAGATTGACTTAGATGATATGATGACATTTGTTGTGGATGAGGTGGACTGCATGCTGGAAAGGGGTTTCCGAGATCAGGTCATGCAGATATATAGGGCTTTGTCCCAGCCCCAGGTATTGATGTATTCAGCAACAATCTCTCATGAGTTAGAGAAGATGGCAAACTCTCTGGCGAAAGATACTGTGGTTATATCTGTGGGTGATCCTAATAGACCAAATAAGGCTGTGAAGCAGCTAGCTATTTGGGTTGACTCAAAGCAGAAGAAGCAGAAGCTGTTTGACATTTTGGTCAGTAAGCAGCATTTTAAGCCGCCTGTGGTTGTGTATGTGGGGTCTAGACTTGGGGCAGATCTTCTGGCCAATGCTATTACAGTTACCACTGGGATCAAAGCACTGTCAATTCATGGGGAGAAGTCTATGAAGGAAAGGAGAGAAATTATGAGTTCCATTTTAGTAGGTGAGGTTCCAGTGGTTGTGGCAACTGGAGTTTTGGGTAGAGGGGTTGATCTATTAGGTGTAAGACAGGTAATTGTGTTTGACATGCCTAATTCAATTAAGGAGTATGTACATCAGGTTGGAAGGGCGTCTAGGATGGGAGAGGAAGGTCAAGCCATAGTTTTTGTGAATGAGGAGAATAAGAATGTCTTTGCAGAGTTGACTGAAGTCTTAAAATCTGCCGGAGCAGCTGTGCCTCGGGAGCTTGTCAACTCAAGATATGCCAAGGGATTTTTCTCTGGTGGCAAAGGTCCAAAAAAGAGGAAGAACAGTGTTGGTTTAATCCATCAACCCAAGCCAGAGATTGCTAAAATTTTGATCCAGGCCCCGTGTTTCATGGTACTTAAAACTGCTGCTGAAACAATGATGTTACCTCCTTTCCACCTTCAGACAATGACATTGGAATTGGACACTTGCAAGAAAAGAATGAGAGAAAACTTTCAAAGGAAAAACTTAGGTGGGAAAGAGGGTACTACAGAGTTAGCTTGGAAGGATCTTATGGTAGATATGGAACCTGAACTCTACACCACAACTCGTGAATCGCGAAGCGATGTTAAGTAG 1899 0.4371 MDSLDSDQKCPLQSSALATDGDAPTDAGDDVKLRSRDQREALPGEPKCVICGRYGEYICDETDDDVCSLECKQKLLQRTACPSLPAVTRSSKMLPATDECFYVRDNDYASGTQSRNEVDMLRKKLDIHVKGDVVAPILSFSSCNLPDKLLHNIEAAGYDMPTPVQMQAIPAALTGKSMLVLADTGSGKSASFLIPVVSHCARHRLEHASDKKMPLAMVLTPTRELCIQVEEHAKLLGKGLPFKTALVVGGDAMAGQIYRIQQGVELIVGTPGRLVDLLTKHEIDLDDMMTFVVDEVDCMLERGFRDQVMQIYRALSQPQVLMYSATISHELEKMANSLAKDTVVISVGDPNRPNKAVKQLAIWVDSKQKKQKLFDILVSKQHFKPPVVVYVGSRLGADLLANAITVTTGIKALSIHGEKSMKERREIMSSILVGEVPVVVATGVLGRGVDLLGVRQVIVFDMPNSIKEYVHQVGRASRMGEEGQAIVFVNEENKNVFAELTEVLKSAGAAVPRELVNSRYAKGFFSGGKGPKKRKNSVGLIHQPKPEIAKILIQAPCFMVLKTAAETMMLPPFHLQTMTLELDTCKKRMRENFQRKNLGGKEGTTELAWKDLMVDMEPELYTTTRESRSDVK 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1141 632 Pfam Helicase conserved C-terminal domain 371 480 IPR001650 -
Lele15g1141 632 SMART helicmild6 398 480 IPR001650 -
Lele15g1141 632 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 356 519 IPR001650 -
Lele15g1141 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 347 IPR027417 -
Lele15g1141 632 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 169 345 IPR014001 -
Lele15g1141 632 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 138 166 IPR014014 GO:0003724
Lele15g1141 632 SMART ultradead3 157 360 IPR014001 -
Lele15g1141 632 Gene3D - 105 347 IPR027417 -
Lele15g1141 632 PANTHER ATP-DEPENDENT RNA HELICASE RHLE-RELATED 135 517 - -
Lele15g1141 632 MobiDBLite consensus disorder prediction 1 20 - -
Lele15g1141 632 CDD SF2_C_DEAD 357 489 - -
Lele15g1141 632 FunFam DEAD-box ATP-dependent RNA helicase 41 28 84 - -
Lele15g1141 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 286 494 IPR027417 -
Lele15g1141 632 Gene3D - 27 82 - -
Lele15g1141 632 Gene3D - 348 521 IPR027417 -
Lele15g1141 632 MobiDBLite consensus disorder prediction 1 38 - -
Lele15g1141 632 Pfam HIT zinc finger 46 72 IPR007529 -
Lele15g1141 632 Pfam DEAD/DEAH box helicase 162 333 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1141 Lele-ChrLele15 6609334 6611970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1141 132 512 Eukaryotic Initiation Factors Gene Family AT3G19760 27.979 5.31e-52 182