Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1135 ATGCCTCCACGTGATCAAATATCCCGTGTCACAAAAATGTTAGGAGATGAATTTGGAACTGCTTCAAACATCAAGAGTAGGGTGAACAGGCAGTCAGTTTTGGGAGCCATTACTTCTGCTCAACAAAGGCTGAAGCTCTACAACAAGGTTCCTCCAAATGGTTTGGTTCTTTATACTGGAACCATTGTTACTGAAGATGGCAAGGAAAAGAAGGTGACAATTGATTTTGAACCTTTCAAGCCTATCAATGCTTCACTTTACCTCTGTGATAACAAGTTTCACACTGAAGCTCTTAATGAACTTTTGGAATCCGATGACAAGTTTGGTTTTATTGTTATGGATGGAAATGGAACCCTTTTTGGTACATTAAGTGGCAATACTCGTGAGGTGCTTCACAAATTTACTGTTGATTTACCAAAGAAACATGGTAGAGGAGGGCAGTCAGCTCTACGTTTTGCTCGTCTTCGCATGGAAAAACGGCACAACTACGTTAGAAAGACTGCAGAACTTGCTACACAGTTTTTCATCAATCCCGCTACTAGTCAGCCTAACGTTTCTGGACTTATTCTTGCTGGTTCAGCTGATTTCAAGACTGAACTGAGCCAGTCAGATATGTTTGATCCCCGTTTACAGGCAAAGATATTAAATGTAGTTGATGTTTCTTATGGTGGGGAGAATGGTTTCAATCAAGCCATTGAGCTATCTGCAGAAATCTTGTCAAATGTGAAGTTTATACAAGAGAAGCGCTTGATAGGGAAATATTTTGAGGAGATCAGCCAGGATACTGGGAGATATGTCTTCGGAGTTGATGACACGTTGAAGGCTCTGGAGATGGGTGCTGTGGAAACACTCATCGTGTGGGAAAGTTTGGATATAAATAGGTATGTGTTGAAAAATGGTACCACTGGTGAGATTGTCATAAAGCATTTGAACAAGGAACAAGAGGCTGATCAAAACAACTTCCGAGATTCAGCCACATCTGCAGAGTTGGAGGTTCAGGAAAAAATGCCCTTGCTTGAGTGGTTTGCAAATGAGTACAAACGGTTTGGTTGCTCACTGGAATTTGTGACCAACAAATCTCAAGAAGGATCACAATTTTGCAGAGGGTTTGGTGGCATCGGTGGTATCCTTCGCTACCAGCTTGACATCAGATCATTCGACGAGTTTTCTGATGATGGAGAGGTGTACGAGGATTCCGACTAA 1203 0.4181 MPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGRYVFGVDDTLKALEMGAVETLIVWESLDINRYVLKNGTTGEIVIKHLNKEQEADQNNFRDSATSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDIRSFDEFSDDGEVYEDSD 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1135 400 SMART eRF1_1_2 1 103 IPR005140 -
Lele15g1135 400 Gene3D - 242 400 IPR029064 -
Lele15g1135 400 Pfam eRF1 domain 3 244 381 IPR005142 -
Lele15g1135 400 Pfam eRF1 domain 2 107 240 IPR005141 -
Lele15g1135 400 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 1 103 IPR024049 -
Lele15g1135 400 FunFam Eukaryotic peptide chain release factor subunit 1 99 240 - -
Lele15g1135 400 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 2 380 IPR004403 GO:0003747|GO:0006415
Lele15g1135 400 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 392 IPR004403 GO:0003747|GO:0006415
Lele15g1135 400 SUPERFAMILY L30e-like 241 383 IPR029064 -
Lele15g1135 400 Gene3D eRF1 domain 2 99 240 IPR042226 -
Lele15g1135 400 SUPERFAMILY Translational machinery components 105 239 - -
Lele15g1135 400 FunFam Peptide chain release factor subunit 1 242 400 - -
Lele15g1135 400 Gene3D eRF1 domain 1 1 98 IPR024049 -
Lele15g1135 400 Pfam eRF1 domain 1 2 101 IPR005140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1135 Lele-ChrLele15 6580414 6581616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1135 1 400 Eukaryotic Initiation Factors Gene Family AT3G26618 92.250 0.0 770