Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1125 ATGGCTACCCCACAGTCCCATTTACCTCCTGGTTTCAGGTTTCATCCTACCGATGAGGAGCTCATTCTTCACTATCTCAGGAAGAAGGTCGCCTCCATGCCCTTACCCGTCTCCATCATTGCCGAGGTTGATATCTACAAGTTTGATCCCTGGGACTTACCTGAGAAGGCAGCGTTTGGGGATAAGGAATGGTACTTCTTCAGTCCTCGAGACCGCAAGTACCCGAACGGGGCGAGGCCGAACAGGGCGGCTGCTTCAGGGTACTGGAAGGCGACGGGAACTGATAAGACCATAGTGGCGTCGTTGCCGGGAGGCGGAGCGACGGAGAGCATGGGCGTGAAGAAGGCTCTGGTGTTCTACACCGGAAAACCACCCAAGGGCGTCAAGACCAACTGGATCATGCACGAATATCGCCTCCTCCACGACACCAGAAACAGACCCCTCAAGTTCCAAGGCATGAGGTTAGATGACTGGGTTCTTTGCCGGATTTACAACAAGTCCAAATATGCTGCTGAATCTCCCACTGCTGAAGCAGAAACCTTGGTGCCCGACCAAGATGTCGCACATGAGCAGATGTTACCGAGCTCTCAATCTCCCCCTCCTCATCAAAATCTGATTTCTCAGAAATCATTGTCTTTGTCGAACCTGTTAGACGCCACCGACTTCTCCATGTTGAGCAGCTTATTATCCGACAACTATTCCACCCCACCTGGGTTTGAATCTGCTGCTGCCGCTAATTCTAACTCTGAGATTATCAATCTGGATCAGCAATCATCACAAAACATTCATCCCAACAACAACAGCTACTTGCTTCAGAGGACCCCCCAATTGAACCACTCCGTCCAAAACACAGATACGAATAACATGCACAAGCGTCAGATTTCAGGCCTGGACGAGGATGTTTCATACCCATCCAAGAGGCATATCACCTCTTCCTGCAGTTTCCGTAATAACAATACCAACCAACTCGAGAACTTTCTCCTCAAGCAGTCCTTGTTGAACCAGCAGTTACTTCTCGGTCCTCAGTATCTTCGCTTTCAGGGATAA 1047 0.5014 MATPQSHLPPGFRFHPTDEELILHYLRKKVASMPLPVSIIAEVDIYKFDPWDLPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKTIVASLPGGGATESMGVKKALVFYTGKPPKGVKTNWIMHEYRLLHDTRNRPLKFQGMRLDDWVLCRIYNKSKYAAESPTAEAETLVPDQDVAHEQMLPSSQSPPPHQNLISQKSLSLSNLLDATDFSMLSSLLSDNYSTPPGFESAAAANSNSEIINLDQQSSQNIHPNNNSYLLQRTPQLNHSVQNTDTNNMHKRQISGLDEDVSYPSKRHITSSCSFRNNNTNQLENFLLKQSLLNQQLLLGPQYLRFQG 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1125 348 PANTHER NAC TRANSCRIPTION FACTOR 56 8 234 - -
Lele15g1125 348 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Lele15g1125 348 SUPERFAMILY NAC domain 3 166 IPR036093 GO:0003677|GO:0006355
Lele15g1125 348 FunFam NAC transcription factor 56 17 171 - -
Lele15g1125 348 Gene3D NAC domain 17 171 IPR036093 GO:0003677|GO:0006355
Lele15g1125 348 ProSiteProfiles NAC domain profile. 8 166 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1125 Lele-ChrLele15 6515195 6516405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1125 4 348 NAC Transcription Factor Family AT3G04070 51.261 5.33e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele15g1125 NAM 1.4e-40 No_clan