Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1100 ATGGCAGCCGAGAAGAGAGAATTGGAGATCTCCAACAAGACTTCCAATGCTAACTCTAACAACACTAACCTCGTGCAAATCGTAGATTCTTCACCTCCTTTGGCTTCCGTTGGCAACGATACTTCTAATAAGGAGGCTGAAGAACGACAGGCTCGTGACCTCAAAGCTGGTCTTCATCCCCTAAAGCACAAATTTGTATTTTGGTACACCCGCCGTTCACCTGGAGTTCGAAATCAGACATCATACGAAGACAACATAAAGAGAATTGCTGATTTCAGTACGGTTGAAGGTTTTTGGGTTTGCTATTGCCATCTGGCCCGCCCTTCCTCCTTGCCAGTTCCAACAGATTTGCATCTTTTTAAGGAAGGAATTCGTCCTTTATGGGAGGACCCAGCTAATTGTAATGGTGGTAAGTGGATCATACGATTCAAAAAGGTCGTTTCAGGTCGCTTTTGGGAGGACTCGGTTCTTGCCTTAGTAGGTGACCAGCTCGATTATGGGGATAACATATGTGGTGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGACCATCAGGCCGTGATGGCTCTGAGGGATTCAATTAAACGTCACTTAAAGCTTCCTCATAACTATGTCATGGAATACAAGCCCCATGATGCCTCTTTGCGAGACAATTCATCCTACAGAAACACCTGGTTGAGAGGGTAG 717 0.4505 MAAEKRELEISNKTSNANSNNTNLVQIVDSSPPLASVGNDTSNKEAEERQARDLKAGLHPLKHKFVFWYTRRSPGVRNQTSYEDNIKRIADFSTVEGFWVCYCHLARPSSLPVPTDLHLFKEGIRPLWEDPANCNGGKWIIRFKKVVSGRFWEDSVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHNYVMEYKPHDASLRDNSSYRNTWLRG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1100 238 Gene3D RNA Cap, Translation Initiation Factor Eif4e 32 231 IPR023398 -
Lele15g1100 238 MobiDBLite consensus disorder prediction 1 50 - -
Lele15g1100 238 ProSitePatterns Eukaryotic initiation factor 4E signature. 116 139 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lele15g1100 238 FunFam Eukaryotic translation initiation factor NCBP 32 231 - -
Lele15g1100 238 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 41 227 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lele15g1100 238 MobiDBLite consensus disorder prediction 12 41 - -
Lele15g1100 238 Pfam Eukaryotic initiation factor 4E 60 218 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lele15g1100 238 SUPERFAMILY eIF4e-like 47 234 IPR023398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1100 Lele-ChrLele15 6369726 6372372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1100 41 238 Eukaryotic Initiation Factors Gene Family AT5G18110 80.808 2.95e-122 345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1345 13 23383545 23386201 Lele15g1100 15 6369726 6372372 hybridization
Lele14g1252 14 21709683 21712497 Lele15g1100 15 6369726 6372372 hybridization