Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1060 ATGAATTCTTTCAGATATAGCAAACATGAAAGCTGTGGGGCATACGTAGGGCAAAGCCAGGGTTGTGATGCATCCATACTTATAGATTCCACTGGGAACAAGAAATCAGAAAAGGACGCCCCACCAAATAAGAGGCTAGAAGGATTCGATCTGATTGATGAGGTGAAAGAAATGCTTGAAGCTGCATGTCCTTCAATAGTATCATGCGCAGACATCATAGCACTTGCAACGAGAGACGCCGTGGCCTTGTCTGGTGGACCCAGGTACGAGGTTCCTACGGGAAGACGCGACGGGCTTGTGTCTGATTCTAATGAAGTGATGAGGAATATTCCATCACCAAACATGACTGTTTCTGAAGCTTCACAAATGTTTGCTTCAAAGGGATTCACAAAGCAAGAAATGGTGACCCTTTTGGGTGCACACACGGTTGGGGTTGCTCACTGTAACGTGTTCAGAGATAGACTTTCAAACCCTCGGGATCCGACAATGGACAAAACCTTGTATGTAGAGCTGGTCAACAAGTGTAGTGTTCCACAAGATCCGTTTGCATCCTTGGACCAAGGAAACCTGGTTGAGAACTTTGATAACCAGTTCTATATACAGATACTTCTCAAAAGAGGCGTTCTGCGGCTTGACCAGAGAATTGCACTGGACAATTCTACGATGGGTTTCGTCTCTGATTTTGCATTCAATCGTGATAAGTTCTACAAGAGCTTCGCGGATGCAATGATAAAGATGGCAAGTGTTCAAGTTCTGGTCGGAAGTGCTGGAGAAGTTCGAAAGAACTGCAGGGTTTTCAATTAA 804 0.449 MNSFRYSKHESCGAYVGQSQGCDASILIDSTGNKKSEKDAPPNKRLEGFDLIDEVKEMLEAACPSIVSCADIIALATRDAVALSGGPRYEVPTGRRDGLVSDSNEVMRNIPSPNMTVSEASQMFASKGFTKQEMVTLLGAHTVGVAHCNVFRDRLSNPRDPTMDKTLYVELVNKCSVPQDPFASLDQGNLVENFDNQFYIQILLKRGVLRLDQRIALDNSTMGFVSDFAFNRDKFYKSFADAMIKMASVQVLVGSAGEVRKNCRVFN 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1060 267 FunFam Peroxidase 111 246 - -
Lele15g1060 267 Gene3D Peroxidase, domain 2 112 247 - -
Lele15g1060 267 PRINTS Haem peroxidase superfamily signature 67 84 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Haem peroxidase superfamily signature 85 97 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Haem peroxidase superfamily signature 133 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 ProSiteProfiles Plant heme peroxidase family profile. 20 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 ProSitePatterns Peroxidases proximal heme-ligand signature. 133 143 IPR019793 -
Lele15g1060 267 CDD secretory_peroxidase 20 266 IPR033905 GO:0004601|GO:0042744
Lele15g1060 267 SUPERFAMILY Heme-dependent peroxidases 14 267 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 Pfam Peroxidase 12 229 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Plant peroxidase signature 241 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Plant peroxidase signature 47 60 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Plant peroxidase signature 85 100 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Plant peroxidase signature 66 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Plant peroxidase signature 132 144 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 PRINTS Plant peroxidase signature 201 218 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 Gene3D - 20 264 - -
Lele15g1060 267 PANTHER - 19 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele15g1060 267 FunFam Peroxidase 20 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1060 Lele-ChrLele15 6153812 6155394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1060 20 267 Peroxidase AT4G26010 52.209 8.02e-88 263