Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1059 ATGAGTTCACAAAACTTCAACAATGGGGTTGATGGTTTTTGTGGGGACGTCAATCTTTTACCTCAAGTTCCTTCTTATGTATCCCCTCTTCTAGTTCGAAGTCCCCAACTTTCACCGTCAAAAACTTATGGTCAGACTGGTGGCGAGATTGGTTTTCAGATTCTGAGCCATTCATTTGTGCCCCGGGAGAACAGGGGAACAATGAGAGGCGACGGTGAAGCTGATGGACCTTCAGGGGCTCAGAACAGGAGCTTGCCTTTCAAACTCGGCGAGGAGGACTTCGAAGCTAAGAGCTCTTCTGGGTTGAGAAATGGACACACCAAGCTCTGTGCTAGAGGACACTGGAGGCCAGCTGAAGATGCCCGACTCAGAGAGCTCGTAGCTCAGTTCGGTCCTCAAAATTGGAACATGATCGCCGACCACCTCCAAGGAAGATCAGGTAAAAGCTGCAGACTGAGGTGGTTCAATCAACTTGATCCCAGAATTAACAGGAGGGCGTTCTCCGAGGAAGAAGAAGCGAGATTATTGTCCGCTCATAGAATGTACGGGAACAAATGGGCCATGATAGCGAAACTGTTTCCTGGGAGGACAGATAATGCAGTTAAGAACCACTGGCACGTTATAATGGCCAGGAAGCACAGAGAGCAATCGAGTGGTTGTAGGAGGAGGAGATCTTCTTCCGAAATCATGCGTCCACAGGCTTTAAATTTGTCTCTCTCAAATAATGCAGCGAGCGAATCCACCAACTGCAGCAACCCCATAGATGAATCTGCCTCATCCTCCACCGATCTCTCCCTCAGCCCCACATTTTTCCCAAACCCGAGTCCCCAAATGGGTCTGTCCAATGAGATGAAGTTGAAAAGTGGGGACGTGGGATTGGACAGATTGTTCGCGGGTTGGAAGGAATGGATCGAGGGAGGAGCACGAATGGGGAAGGTGATGATGGGTGGAGGGGAGCGATCAAAATCAAATTCAGAGTCAAACTCAGAAACATCAGTATCTGAGTCAGTGGCCACCAACAGGACAAACCTCTCAATTTCTGGGGAAAGAACAGTTGCAGATGATTGGGGGGAAACAGAAGCATGTGGTAGATGCACTCCATTTTGTACAGAGGTAAAGCCAAGGAAGGCTGAATTGGGTCTGGGTGTAAGCGGTGGAGTCATTATAATTGGTTGTTTACTTGGGAAAACATGCCGTTGGTTGGGGTTTGGCACCTTTTCAATTGGGCATGGTTACTCTGATGATGGTGGTGGTGGTTATCATACGGAGACGGACTTGGACTTGCATTTGCACCGCCATCAGCCTGATGATGAGGCTGAAGCTGGTGGTGATGAAGGGCCTCGGCGGCGAGCTGCTGCAACTGGCGCTGACGGCGGCGAGCTGCTGCAACTGGCGCTGACGGCGGCGTGA 1410 0.5028 MSSQNFNNGVDGFCGDVNLLPQVPSYVSPLLVRSPQLSPSKTYGQTGGEIGFQILSHSFVPRENRGTMRGDGEADGPSGAQNRSLPFKLGEEDFEAKSSSGLRNGHTKLCARGHWRPAEDARLRELVAQFGPQNWNMIADHLQGRSGKSCRLRWFNQLDPRINRRAFSEEEEARLLSAHRMYGNKWAMIAKLFPGRTDNAVKNHWHVIMARKHREQSSGCRRRRSSSEIMRPQALNLSLSNNAASESTNCSNPIDESASSSTDLSLSPTFFPNPSPQMGLSNEMKLKSGDVGLDRLFAGWKEWIEGGARMGKVMMGGGERSKSNSESNSETSVSESVATNRTNLSISGERTVADDWGETEACGRCTPFCTEVKPRKAELGLGVSGGVIIIGCLLGKTCRWLGFGTFSIGHGYSDDGGGGYHTETDLDLHLHRHQPDDEAEAGGDEGPRRRAAATGADGGELLQLALTAA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1059 469 MobiDBLite consensus disorder prediction 433 451 - -
Lele15g1059 469 MobiDBLite consensus disorder prediction 229 265 - -
Lele15g1059 469 Pfam Myb-like DNA-binding domain 112 158 IPR001005 -
Lele15g1059 469 Pfam Myb-like DNA-binding domain 164 207 IPR001005 -
Lele15g1059 469 MobiDBLite consensus disorder prediction 212 228 - -
Lele15g1059 469 ProSiteProfiles Myb-like domain profile. 159 209 IPR001005 -
Lele15g1059 469 SUPERFAMILY Homeodomain-like 112 205 IPR009057 -
Lele15g1059 469 MobiDBLite consensus disorder prediction 212 265 - -
Lele15g1059 469 CDD SANT 166 206 IPR001005 -
Lele15g1059 469 FunFam MYB transcription factor 112 163 - -
Lele15g1059 469 Gene3D - 165 233 - -
Lele15g1059 469 CDD SANT 115 156 IPR001005 -
Lele15g1059 469 MobiDBLite consensus disorder prediction 320 346 - -
Lele15g1059 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 158 IPR017930 -
Lele15g1059 469 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 159 213 IPR017930 -
Lele15g1059 469 SMART sant 111 160 IPR001005 -
Lele15g1059 469 SMART sant 163 211 IPR001005 -
Lele15g1059 469 ProSiteProfiles Myb-like domain profile. 112 158 IPR001005 -
Lele15g1059 469 MobiDBLite consensus disorder prediction 314 346 - -
Lele15g1059 469 PANTHER MYB PROTEIN-RELATED 112 312 - -
Lele15g1059 469 MobiDBLite consensus disorder prediction 62 85 - -
Lele15g1059 469 Gene3D - 112 163 - -
Lele15g1059 469 MobiDBLite consensus disorder prediction 433 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1059 Lele-ChrLele15 6143537 6149338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1059 110 225 MYB Transcription Factor Family AT1G69560 81.034 7.47e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele15g1059 Myb_DNA-binding 7.6e-14 CL0123