Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1038 ATGTATCACGCAAAGAAGTTTCCCCCGGGAACTGTCGTACCAAATAAAGCTCAAGGTGGTGCTGAGCAGCTGGCAAGCATACCGGATTTGAGTGGATCTGCAGTGAAAAATGACACACCTGTGGGAGGAAGTGGGAAACAACGATTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATTACGCATCTCGGTGGACCAGATAGGGCAACTCCAAAAGGCGTTCTACGGGTTATGGGCGTACCTGGACTCACAATTTATCATGTTAAAAGCCATTTACAGAAATACCGCCTTGCAAAGTACTTGCCAGAGTCTTCAGCTGACGAGTCAAAGGATGAGAAAAGGAATTCTGGGGACACCATATCTGGCATAGATTCTTCCCAACTGACGTTGAAAATAGGAAACAGGCATAAATCAAATAGAGTTCAAAAGCAGTTACAAATGAGAATTGAAGCACAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGTAATACCTTGAGAGATTCGGAAACACTACCATCATCAAAAGATGAGCAAGATCCTCTGCACTCAGAACCTTTGGGTGATGCCTCTGCAGAGACACAGTCTCCGTTGAAGAAACAGAGAGTTGATGATGACTCCAAAAATGGCATCACGACCCTCCCAGCTACCAATAAGGATTGCACAGAAGATTGA 696 0.4511 MYHAKKFPPGTVVPNKAQGGAEQLASIPDLSGSAVKNDTPVGGSGKQRLRWTSDLHDRFVDAITHLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADESKDEKRNSGDTISGIDSSQLTLKIGNRHKSNRVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRDSETLPSSKDEQDPLHSEPLGDASAETQSPLKKQRVDDDSKNGITTLPATNKDCTED 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1038 231 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Lele15g1038 231 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Lele15g1038 231 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 201 IPR044848 GO:0003700
Lele15g1038 231 FunFam Myb family transcription factor 45 103 - -
Lele15g1038 231 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Lele15g1038 231 MobiDBLite consensus disorder prediction 106 121 - -
Lele15g1038 231 MobiDBLite consensus disorder prediction 215 231 - -
Lele15g1038 231 MobiDBLite consensus disorder prediction 171 231 - -
Lele15g1038 231 Pfam MYB-CC type transfactor, LHEQLE motif 144 168 IPR025756 -
Lele15g1038 231 MobiDBLite consensus disorder prediction 122 138 - -
Lele15g1038 231 MobiDBLite consensus disorder prediction 106 144 - -
Lele15g1038 231 Gene3D - 45 104 - -
Lele15g1038 231 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1038 Lele-ChrLele15 6043853 6047157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1038 44 188 G2-like Transcription Factor Family AT3G04450 46.497 5.80e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele15g1038 Myb_DNA-binding 4.6e-06 CL0123