Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1027 ATGGAGAACAGTTTGGGTCAAGACTCTAATCCAGCACATGGGTCCTTTGATAAGTCTAGGGTTTTGAATGTTAAGCCATTGCGAAGTCTTGTTCCTATATTCCCTTCACCATCTAATGCCTCTTCGTTTTCAAATTCACAAGGCGGGGCGCCCTTTGTTTCAGTCTCTCCTTCTGGCCCCTTCCCCCCTGGCATTTCCTCCTTCTACCCGTTCTTATTCTCTCCAGAGTCTCAGAGATTCCCTGAACAAAATCTGCAAACCCCAGCAGCTGGTGTGCCTGCGGTTCCACTTAATTCATTTAGGACGCCAACACCAAGAGCTAAGGCTAATACTAATGGAGCTGCAGGGTCATCTAGAAGAAGCAAAAAGGGTTTCACGAATGACGATGGCTATAGTAATAGCCATCAAATCAATTTTGAGGTGAATGAAACAGATGGAGAAGACGGAAGCCAGGAAACAAGGCTTATATCACAGAAGAAGAAAAAAGGAAGGCAGGGAGGTGGCTCTGCAGCAGTGGAGGTTGATGTGGATGCAGTATCTAATGATATTCTCAAGTCAATTAATCCCATTGTTTTTGATGTCTTGAATCAACCAGATGGTAACAAAGATGCAGTTTCATATACACTTATGATATTTGAAGTGATAAGAAGGAAGATAACACAAATTGAAGATCTGAAAGACGGAAATCCTGGAGTGGCAAGGCGGCCTGATTTGAGGGCAGGCACAATTATGTTGAGTAAAGGGGTTCGGACAAATGGTAAGAAACGTATTGGAGCTGTTCCTGGTGTTGAAATTGGGGATATTTTCTTTTTTAGGATGGAATTGTGTGTGGTGGGGTTGCATGCACCATCCATGGCTGGAATTGATTACATGAGTGTCAAATTCAGTCAAGAAGAAGAGCCATTAGCTGTAAGTATTGTCTCGTCTGGAGGATATGAAGATAATACAGAGGATGGGGATGTTCTGATTTACAGTGGCCAAGGTGGGGCTAATGGAAGTGATCAAAAGCTTGAAAGAGGTAATCTTGCATTGGAAAAGAGTCTGCATCGAGGTAACGAAGTTAGAGTAATTAGAGGTCTCAAGGACAGTAGTAACCCTATGGGGAGGATATATGTTTATGACGGCCTTTACAAAATTCAACACTCATGGATAGAAAAAGGAAAATCAGGTTTCAGTGTATTTAAGTATAAATTAGTCAGGCTGCCTGGGCAGGCTGAAGCATACATGACATGGAAATCCATTCAGCAATGGATCGAGAAGTCTACTTCAAGAGTTGGGGTTATATTGCCTGATCTTACTTCTGGGGCTGAAAAGGTTCCTGTTTGTCTAGTGAATGATGTTGATAGTGAGAAGGGCCCTGCATATTTCACCTACTGCCCTTCTCTCAGGAATCTGAAGCCAGCAAATCCCATAGATCAATCTGCTGGATGTAATTGTACCGGTGGATGCCGTGTAAGCAACTTTAACTGTTCTTGCATTCAAAAGAATGGAGGTCATCTCCCGTATTCTGCAAATGGGGTACTCTTGGACTTAAAATCTGTGATATATGAGTGTGGTCCTTCATGTCAGTGCCCTCCGAATTGTCGAAATAGGGTTTCTCAAGGTGGCTTGAGAGTTCGTTTGGAGGTTTTTAAAACTAAGAACAAAGGGTGGGGTTTAAGATCCTGGGATCCTATTCGTGCAGGAGCTTTTATATGTGAGTATGCGGGTGAAGTCATAGATAATGCTCGAGTGGAGGAGCTTGGTGTTGAAAATGAAGATGATTACATATTTGACTCTACTCGCATTTATCAGCAGCTTGAAGTTTTTCCTAGTGAAACTGAAGCTCCTAAGATTCCGTATCCCCTCTATGTAACAGCAAAGAATTATGGGAATGTTGCTCGGTTTATGAACCACAGCTGTTCTCCAAATGTATTCTGGCGCCCTGTTGTGCGTGAAAACAAACATGAATCTGATCTCCACATTGCTTTCCATGCAGTCAGACATATCCCTCCCATGACCGAGTTGACATATGATTATGGAATAGTTCTTCCTCTCAAAGCAGGCCAGAGGAAAAAGAAATGCCTATGCGGATCAGCAAAATGTAGGGATTACTTTTGTTAG 2103 0.4275 MENSLGQDSNPAHGSFDKSRVLNVKPLRSLVPIFPSPSNASSFSNSQGGAPFVSVSPSGPFPPGISSFYPFLFSPESQRFPEQNLQTPAAGVPAVPLNSFRTPTPRAKANTNGAAGSSRRSKKGFTNDDGYSNSHQINFEVNETDGEDGSQETRLISQKKKKGRQGGGSAAVEVDVDAVSNDILKSINPIVFDVLNQPDGNKDAVSYTLMIFEVIRRKITQIEDLKDGNPGVARRPDLRAGTIMLSKGVRTNGKKRIGAVPGVEIGDIFFFRMELCVVGLHAPSMAGIDYMSVKFSQEEEPLAVSIVSSGGYEDNTEDGDVLIYSGQGGANGSDQKLERGNLALEKSLHRGNEVRVIRGLKDSSNPMGRIYVYDGLYKIQHSWIEKGKSGFSVFKYKLVRLPGQAEAYMTWKSIQQWIEKSTSRVGVILPDLTSGAEKVPVCLVNDVDSEKGPAYFTYCPSLRNLKPANPIDQSAGCNCTGGCRVSNFNCSCIQKNGGHLPYSANGVLLDLKSVIYECGPSCQCPPNCRNRVSQGGLRVRLEVFKTKNKGWGLRSWDPIRAGAFICEYAGEVIDNARVEELGVENEDDYIFDSTRIYQQLEVFPSETEAPKIPYPLYVTAKNYGNVARFMNHSCSPNVFWRPVVRENKHESDLHIAFHAVRHIPPMTELTYDYGIVLPLKAGQRKKKCLCGSAKCRDYFC 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1027 700 Pfam SAD/SRA domain 257 404 IPR003105 -
Lele15g1027 700 SMART preset_2 429 523 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele15g1027 700 Gene3D SET domain 423 699 IPR046341 -
Lele15g1027 700 SMART set_7 539 680 IPR001214 GO:0005515
Lele15g1027 700 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 127 699 IPR025794 GO:0016571
Lele15g1027 700 SUPERFAMILY PUA domain-like 240 419 IPR015947 -
Lele15g1027 700 ProSiteProfiles Post-SET domain profile. 684 700 IPR003616 -
Lele15g1027 700 MobiDBLite consensus disorder prediction 103 144 - -
Lele15g1027 700 ProSiteProfiles YDG domain profile. 258 400 IPR003105 -
Lele15g1027 700 MobiDBLite consensus disorder prediction 97 171 - -
Lele15g1027 700 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 102 693 - -
Lele15g1027 700 MobiDBLite consensus disorder prediction 1 21 - -
Lele15g1027 700 MobiDBLite consensus disorder prediction 1 16 - -
Lele15g1027 700 Gene3D - 241 422 IPR036987 -
Lele15g1027 700 ProSiteProfiles SET domain profile. 539 674 IPR001214 GO:0005515
Lele15g1027 700 SUPERFAMILY SET domain 415 680 IPR046341 -
Lele15g1027 700 ProSiteProfiles Pre-SET domain profile. 475 536 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele15g1027 700 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 241 419 - -
Lele15g1027 700 Pfam SET domain 550 674 IPR001214 GO:0005515
Lele15g1027 700 Pfam Pre-SET motif 433 531 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele15g1027 700 SMART G9a_1 253 404 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1027 Lele-ChrLele15 5984475 5986577 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1027 10 699 Su(var)3-9 homologs AT1G73100 49.441 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele15g1027 SAD_SRA 2.1e-50 CL0178