Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1020 ATGGGAAAGGCCGACGAAGAGCAGCCTTCGCCTTACAGTTTAGCCTCCGAGGATCCCCAGCAAAATGTGGAGCTCCGGTGTGGGTGTAGCTATTCCGCAATTCGAAAATTCATTGGTCTCAGATGCATTTTCATTCTGCTATTATCTGTTGCCGTGTTTCTCTCCGCTGTATTTTGGTTACCCCCGTTCTTTGGGTACTCAGATCAGAAGGATCTGAACTCCGATGCCAAGTACAAAGATCATGATATTGTTGCAAGCTTTGTTGTTGGAAAGCCAGTTTCTTTGCTGCAAGACAACATCTTGCAGCTAGAAGAAGACATTTTTGAAGAGATAGGAGTTCCCTTTACTGAAGTGGTCGTCTTGTCTCTGGATCCCATTCCTGGGACAAACATGACAAAAGTTGTGTTTGCAGTCGATCCTGATGGTGAATATTCAGAAATGTCTTCAGCTGCTGTTAGTTTGACAAGATCATCATTTGAATCTCTGGTTACACGACAATCATTTCTCCATCTTGCTTCAAACTTGTTTGGAGATGTCTTCTTCTTTGAAGTGCTGAAATTGAAGGGAGGACTCACTGTAATTCCCCCACAGAGTGGATTTCTTCTGCAGGCTGGGCAAATACTATTCAACTTTACCTTGAATTTCTCTATCTATCAGATACAATTAAGCTTTGAAGCATTGACTAGTCAGCTAAAGTCTGGATTGCATCTGACACCCTATGAGAACCTGTATGTCATATTATCTAATTCTGAAGGCTCAACAGTAGCTGCGCCTACTATTGTCCAGTCCTCTGTTTTCATGGCAATTGGGATTTCTCCATCAAAGGAGAGGTTAAAGCAACTGGCACAAACCATTACAGGTTCTCATTTTAGGAACCTTGGCTTGAATAACACTGAATTTGGTCGGGTTAAGCAGGTTCGACTTTCATCCATCTTACAGCATTCCCTTCATGGTGGAAGTGGCACATGGTCACCTTCTCCTGCTCCTCTACCTCATCCACACTACCACCATAGGCACCATCATCATCACCACCACCACCATACTGCCCATCAAGCTCCTGTATTTTCACCTACACCTGCACCTGCAGCTGGGAAAGGTGCACTTTCACCTGAGGTTGGCTCTCCTGCAACTCCAAAAAGTGTGCCTGCACCAGGGAGAAGTTCTCAAGCCGAGTCTCCGAATTGTAGATCTGCTCGGAATACTGGAAAACATGCTCATCCTACACCAGCAGTTGCCCCTTCTATGTCCCCACCCCATCCTGTTGCCTCACCAAAACAGCAAGTTGGATCACCTCCTCGTGTCTCTCATTCAGTTCCTGCTTTTAGTCCTTTGCCAAATGTAGCCTTTGCTCATGCTGAGCCCCCTCCTAAGAACGGACCAGCTTCAGAACGTTCTGACACACATTTTCACGGGCCATCACCATCTTCATCTTTTGCAGGTTGTCGAAAAACTTGTGAATGGACATGTTTAATATCCGTAGCGCTTGTGTTATGTATCATAAAGGACTGA 1509 0.452 MGKADEEQPSPYSLASEDPQQNVELRCGCSYSAIRKFIGLRCIFILLLSVAVFLSAVFWLPPFFGYSDQKDLNSDAKYKDHDIVASFVVGKPVSLLQDNILQLEEDIFEEIGVPFTEVVVLSLDPIPGTNMTKVVFAVDPDGEYSEMSSAAVSLTRSSFESLVTRQSFLHLASNLFGDVFFFEVLKLKGGLTVIPPQSGFLLQAGQILFNFTLNFSIYQIQLSFEALTSQLKSGLHLTPYENLYVILSNSEGSTVAAPTIVQSSVFMAIGISPSKERLKQLAQTITGSHFRNLGLNNTEFGRVKQVRLSSILQHSLHGGSGTWSPSPAPLPHPHYHHRHHHHHHHHHTAHQAPVFSPTPAPAAGKGALSPEVGSPATPKSVPAPGRSSQAESPNCRSARNTGKHAHPTPAVAPSMSPPHPVASPKQQVGSPPRVSHSVPAFSPLPNVAFAHAEPPPKNGPASERSDTHFHGPSPSSSFAGCRKTCEWTCLISVALVLCIIKD 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1020 502 MobiDBLite consensus disorder prediction 381 401 - -
Lele15g1020 502 MobiDBLite consensus disorder prediction 315 475 - -
Lele15g1020 502 MobiDBLite consensus disorder prediction 332 350 - -
Lele15g1020 502 PANTHER F20B24.21 1 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1020 Lele-ChrLele15 5950022 5953462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1020 26 491 C3H Transcription Factor Family AT3G10810 45.877 9.22e-98 302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele15g1020 15 5950022 5953462 Lele07g0842 07 4845050 4851198 CCT
Lele13g1416 13 23777993 23781444 Lele15g1020 15 5950022 5953462 hybridization
Lele14g1327 14 22125326 22128205 Lele15g1020 15 5950022 5953462 hybridization