Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1016 ATGGCACTGTCTTCCCCGGTAGTGAATTCCCAAGACACTGGATTTCCTGAGACTCAAATCGGAAACGACGGCCTCACAAAACGCATCCTCAAAACAGGACTCTCTTGGCAAACTCCTTCTCCCGGAGACCAAGTCCTAGTTCATTTCAGAGGCCAGGTTCTCAATGGAGCCTCCCTTCAATCAAGTCACGACAATGGGACCCCATTTCGCTTCAACTTAGGCCAACGTGAAGTTATCAGAGGTTGGGATGAAGGAGTTGCCACCATGAAAAAGGGAGAGAGAGCAGTTTTAAAAATACCGCCAAACTTGGCTTATGGGGAGAAAGGTTCTCCACCATTGGTTCCTCCGAAGGCGACTCTCGTCTTTGAGATTGAGATGCTGTCTTGGATTACCATCAGGGACTTGACCGGCGATGGAGGAATCCTGAAGAAGATAATAAGGGAGGGCGAGGGATGGGAGACTCCTAGAGACGCCGACCAGGTCTTAGTGAAATGTGAAGCAAAGCTGGAGAATGGAATGGTTGCTCATGAGTCTAATGAAGGTGTAGAGTTTAATTTAAGTGATGGCTATCTTTGTCCTGCCATGAGTATAGCGTTGAAAACAATGAGAAAGGGGGAGGAAGAAGAGCTCAGTTTAAGATTCTTTTACATTCCTTTTCCAGATGGCGCAATACAAAATTCAAGTAGAACCAGTGAAACGAATGTCAGTGACCAACCAGATTCTAATTTAACAAGTCTCAGAATAGAGCTGGTATCATGGAAAACTGTAGTCGATGTCACAGGAGACAAAAAGATACTTAAGAAGATTGAGAAAGCTGGAGAGGGATTTGAGCGTCCTAATGAAGGATCACAAGTGAAAGACGGAACAATTATTGAGAGGAAAGGAACAGAGGAAGAACCTTTTGAGTTCACAACTCAGGAAGTAAACAAAATTTCTTCACCACAAATGCAGGCTGTAAAATGCCTTGAGTTTGATCACTCATTCAGTGATGATGAGAAACGTGAAGCCAATGCCTTGAGGATATCTTGTTATTTGAACAATGCTGCCTGTAAACTTAAACTGGGAGAGTACACTGAAGCCTCAAAACTCAGTACTAAGGTTCTGGAACAAGATCCATTAAATGTGAAGGCACTGTATAGAAGAAGCCAGGCATACCTGAAAACATCATACTTAGAGAAAGCTGAGGCTGACATTAAAACAGCCCTCACTATTGATCCAAACAACAGAGACACGAGAGTTGAGTACAGGGAGCTGAAGCTTAAGCAAAGGGAATACAATAGATATGAAGCTGACATCTTCAGCACAATGCTTTCGAAGATGGGCTAG 1326 0.4374 MALSSPVVNSQDTGFPETQIGNDGLTKRILKTGLSWQTPSPGDQVLVHFRGQVLNGASLQSSHDNGTPFRFNLGQREVIRGWDEGVATMKKGERAVLKIPPNLAYGEKGSPPLVPPKATLVFEIEMLSWITIRDLTGDGGILKKIIREGEGWETPRDADQVLVKCEAKLENGMVAHESNEGVEFNLSDGYLCPAMSIALKTMRKGEEEELSLRFFYIPFPDGAIQNSSRTSETNVSDQPDSNLTSLRIELVSWKTVVDVTGDKKILKKIEKAGEGFERPNEGSQVKDGTIIERKGTEEEPFEFTTQEVNKISSPQMQAVKCLEFDHSFSDDEKREANALRISCYLNNAACKLKLGEYTEASKLSTKVLEQDPLNVKALYRRSQAYLKTSYLEKAEADIKTALTIDPNNRDTRVEYRELKLKQREYNRYEADIFSTMLSKMG 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1016 441 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 42 130 IPR001179 GO:0003755
Lele15g1016 441 Gene3D - 16 132 IPR046357 GO:0003755
Lele15g1016 441 FunFam Peptidyl-prolyl cis-trans isomerase 17 130 - -
Lele15g1016 441 MobiDBLite consensus disorder prediction 1 20 - -
Lele15g1016 441 PANTHER PEPTIDYLPROLYL ISOMERASE 20 128 - -
Lele15g1016 441 SMART tpr_5 375 408 IPR019734 GO:0005515
Lele15g1016 441 SMART tpr_5 341 374 IPR019734 GO:0005515
Lele15g1016 441 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 153 213 IPR001179 GO:0003755
Lele15g1016 441 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 37 127 IPR001179 GO:0003755
Lele15g1016 441 Gene3D - 133 254 IPR046357 GO:0003755
Lele15g1016 441 Pfam Tetratricopeptide repeat 376 408 IPR019734 GO:0005515
Lele15g1016 441 SUPERFAMILY TPR-like 318 437 IPR011990 GO:0005515
Lele15g1016 441 ProSiteProfiles TPR repeat profile. 375 408 IPR019734 GO:0005515
Lele15g1016 441 Gene3D Tetratricopeptide repeat domain 302 435 IPR011990 GO:0005515
Lele15g1016 441 SUPERFAMILY FKBP-like 135 213 - -
Lele15g1016 441 SUPERFAMILY FKBP-like 18 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1016 Lele-ChrLele15 5923805 5926523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g1016 21 440 Calmodulin-binding Proteins AT5G48570 34.954 1.56e-73 239