Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1002 ATGAAGATAACCGTAGGCCATTTTGAAGCATCTTTTCTGGAAAAAGACACAGATTTTGTGGGGACGTTTGTCAATATATTGTATCGATGTTCTCAAAGCCCTGAGGAGTGGAGAAAATACTTTGAGAGTGGAAACTGTAGCATCTACCAGATCATCTCCAATGCAATAAGAGTGGCTGCTTTGGATGATCCTGAACAGTTCAAACTTCGCAGAAGCAAGATCGTTGAGAGACTCTACTCTTGCAAATTCACTGGGTCTTGCTTCTGTGTTGATCAGACGGAGCAAGATGTTCATCGGTCCATTACACAAGTTTTCCAGGACTGCAAAAACGCATGCGCTCATAAGTACACTAAGGTTGATGATTCAGCAGTCGGAGGAGAAAGAGGGACAGATCAGCAGGCTAATGAACTGGGAAAAAACATTGAAGATGATAGCGAAAATATTCGCCGTGTTTTGCAGATTAAGAATGCGCTCGAGAACAACGCATTGACGGATACTGAAATCCACGAGTCCCTAAGGAAGCTGAAATTGGCGGTTCGATCTGTTGGAGTTATGAAGGCTACAAAAATAGGGAGCACTATAAGTAATCTCAAGCGCCACAAATCAAAGGAGATAAGTCTTTTAGCAACAGCTATGGCTGACCAATGGAAGTCAATGATTGTAGAGTTTGTGGATAAAGCGACAGAAGCTGCAGCAACATCTAAAAACCCTGTGCCTAGCGTTGTTTTTGAAGAGTGGCGAGAATTTCCTTCTGTTGAATTTGTTCCTCAGCCTCCAGTGGAGTTCTCAGAGAAGTTCCTTGACGACATGGATGATTATGAAAATGCTGCTGGTAATAAGGACAATAATGAGAAAGGGACTGAGGAGAGGCAAAAGAATGCTGCAAAAGAAAAGGAGAGTGAAGTGAAGCTGCAAGAAGAAATAATGAAGCTAGAGAAAAGAAAGAAAGAAACGGTTGAGAAATTCATAGATCGCATCAGTTCCAATGGAGCATCCAACAAGAGCAACTTCAAAGTTGAAGAGACTGAGAAGAACCTTTCAATGGGAAACAACAAAAGAAAACTGGAGGAGCAACTAATCGAGGACACAGAGTTCATCACACCCATCAGGCGCCCGAAAGTAGTACCACCGAAGCAAGAATCATCCATTCGTCAGAAACCATGCAGGTCCGCACCAAACCCTAATCTCCCAAAGACAGGAAATCCCTCAGACAGAGATCAGAAGCAGCCAAGAGTGAAGAAAGAGGTTCAAAATAACTATTCTGAGCCTCGTAACAGATACAGGGCCCTTCTTATCAATGCAGAACCCAGAGATGCTAGTCCCCGTGGGAGAGAGGATAATTGCTGGATTTTCATTTTTGGATCTAGCCTCATCGGGATTGATCCACCTTGTGAGTTTTGTGGGATAACCATGAAGTCCGGGTCACTAGAATACTGGAGGAATTACTTCCGGACTGCAACTTCTGATATATTCGACATAATTGACCACGCGATCATGGTGGCGGTTTCCGATTGTCCGAAGGAGTTTAGATTACGAAGAGACGGAATTGCGGAGCGTTTGTTTTCCTGTAGATTGACTCGTTGTGTGGGGTGTGATCGATTAGAGTTGGCGGTTTCCGGTGATGATGAGGAAGATGGAGTTTGTAAGAGTGGTTTTGATCGAGATGCTACTGAATTAGAAGCAGGAGCTAGTAAAGAGAGCAAGGTCAATGGTAGCAGAGACGATCATGGGGAGATTAACAGGAACCAAGTTAGTAATTTTAGTTTTGGAGAAGCTGAGGCATTGACTGATGAGATTGAAGAAGAGTCTCAGATGGTTGGGGAGGTTTTGAGGATCAAAGAGATTCTCCATAACAGCAAGGAAGAGCCTGATTCAGTGTTATTTGAGTCATTGAGGAGGCTCCAGCTGCTGGCACTGACCGTGGATCTTCTCAAGGGAACTGAGATTGGAAAGGCTGTCAATCCTCTGAGGAAGCACGGATCAAAGGAGATCCGTCAACTTGCACGAACTCTTATCGATGGCTGGAAAGAAATGGTAGATGAATGGGTCAAGTCCACAGCAGCTGTAGCGGGTTCAGTAGAAGGCACCCCTGATTCAGTTAATCCATCAGTCGTTGATGAAGAGGAAGGGCTTCCTTCGCCTCCTATGGATGAAGGGGCTTTTCTTGCAGCTCCGCCCGGTCCAATGGAACTCTCACAGTTCTTTGATGGCATGGATGATGATGGAAATTTTCGACAAAGTGGGGAATTCATCAAGACTCGTGAACACATCAGAAAACCGTCTATGGACAATCAAAACGTAGGAAAGAGAAAACCACAGGCTTCCAGTGAGGCCAAGGAGAGCAAATGTCATCAAATGAAGAAAAATGAGGTTGCTATGGGACAGAGTAAACCGGTCTGCACTGATTCTGGCCCTGGCAGGCCACCAAAATCCAGCTTGCAGCAAAAAAGCAACACAGGACCAAAGATGCAGCAGAAACAAGAGAAGAGTGCTATCCCAAAGAGGCCTCTTGTTGCTCAGCAAGATAAATTCAAGGGTTCAGATGATGTTTCAGTCCAAGTAAAACTAGAAGCCACTAAGAGGAAACTTCAGGAGTCTTATCAACAAGCTGAAAATGCCAAGAAGCAGCGGACAATACAGGTTATGGAGTTGCACGATCTTCCAAAGCAAGGGAATGGCCACCGAAATCCACACTTCAAGCCTGGGAACCTCAACAAGCACTGGGCTCACGGACGAAGATAG 2742 0.4482 MKITVGHFEASFLEKDTDFVGTFVNILYRCSQSPEEWRKYFESGNCSIYQIISNAIRVAALDDPEQFKLRRSKIVERLYSCKFTGSCFCVDQTEQDVHRSITQVFQDCKNACAHKYTKVDDSAVGGERGTDQQANELGKNIEDDSENIRRVLQIKNALENNALTDTEIHESLRKLKLAVRSVGVMKATKIGSTISNLKRHKSKEISLLATAMADQWKSMIVEFVDKATEAAATSKNPVPSVVFEEWREFPSVEFVPQPPVEFSEKFLDDMDDYENAAGNKDNNEKGTEERQKNAAKEKESEVKLQEEIMKLEKRKKETVEKFIDRISSNGASNKSNFKVEETEKNLSMGNNKRKLEEQLIEDTEFITPIRRPKVVPPKQESSIRQKPCRSAPNPNLPKTGNPSDRDQKQPRVKKEVQNNYSEPRNRYRALLINAEPRDASPRGREDNCWIFIFGSSLIGIDPPCEFCGITMKSGSLEYWRNYFRTATSDIFDIIDHAIMVAVSDCPKEFRLRRDGIAERLFSCRLTRCVGCDRLELAVSGDDEEDGVCKSGFDRDATELEAGASKESKVNGSRDDHGEINRNQVSNFSFGEAEALTDEIEEESQMVGEVLRIKEILHNSKEEPDSVLFESLRRLQLLALTVDLLKGTEIGKAVNPLRKHGSKEIRQLARTLIDGWKEMVDEWVKSTAAVAGSVEGTPDSVNPSVVDEEEGLPSPPMDEGAFLAAPPGPMELSQFFDGMDDDGNFRQSGEFIKTREHIRKPSMDNQNVGKRKPQASSEAKESKCHQMKKNEVAMGQSKPVCTDSGPGRPPKSSLQQKSNTGPKMQQKQEKSAIPKRPLVAQQDKFKGSDDVSVQVKLEATKRKLQESYQQAENAKKQRTIQVMELHDLPKQGNGHRNPHFKPGNLNKHWAHGRR 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1002 913 MobiDBLite consensus disorder prediction 404 419 - -
Lele15g1002 913 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 147 220 IPR035441 -
Lele15g1002 913 Coils Coil 853 880 - -
Lele15g1002 913 MobiDBLite consensus disorder prediction 328 350 - -
Lele15g1002 913 CDD TFIIS_I 608 680 - -
Lele15g1002 913 MobiDBLite consensus disorder prediction 740 849 - -
Lele15g1002 913 ProSiteProfiles TFIIS N-terminal domain profile. 146 223 IPR017923 -
Lele15g1002 913 MobiDBLite consensus disorder prediction 272 301 - -
Lele15g1002 913 MobiDBLite consensus disorder prediction 773 787 - -
Lele15g1002 913 Coils Coil 141 161 - -
Lele15g1002 913 MobiDBLite consensus disorder prediction 887 913 - -
Lele15g1002 913 Pfam TFIIS helical bundle-like domain 172 220 IPR017923 -
Lele15g1002 913 Pfam TFIIS helical bundle-like domain 631 679 IPR017923 -
Lele15g1002 913 MobiDBLite consensus disorder prediction 368 419 - -
Lele15g1002 913 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 597 690 IPR035441 -
Lele15g1002 913 Coils Coil 294 321 - -
Lele15g1002 913 MobiDBLite consensus disorder prediction 383 403 - -
Lele15g1002 913 ProSiteProfiles TFIIS N-terminal domain profile. 607 682 IPR017923 -
Lele15g1002 913 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 149 233 IPR035441 -
Lele15g1002 913 MobiDBLite consensus disorder prediction 742 765 - -
Lele15g1002 913 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 604 689 IPR035441 -
Lele15g1002 913 MobiDBLite consensus disorder prediction 693 713 - -
Lele15g1002 913 MobiDBLite consensus disorder prediction 807 826 - -
Lele15g1002 913 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 473 901 IPR044805 -
Lele15g1002 913 SMART TFS2_5 148 222 IPR003617 GO:0005634
Lele15g1002 913 SMART TFS2_5 606 681 IPR003617 GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1002 Lele-ChrLele15 5839626 5851343 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Lele15g1002 Med26 1.2e-11 No_clan