Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0995 ATGAGTCAACGAGACTCTTCTCACTCCTCCTGTTTTGCCTACTCAATGGCAAGGCGCTTGGCTCCCTTGCTTAATCGCGTTTTGGTGGAGAAATTCGTTCCTCCATCCAAAACTAACGCCGGGATTTTGCTACCAGAGAAATCCAATACGCTGAACTCTGCAAAAGTTATTGCCGTGGGCCCTGGCATTCATGATAAAGAGGGAAAGCTAATTCCTGTATGTGTAAAGGAGGGTGACACTGTCCTTTTACCTGAATATGGAGGATCGGAGGTGAAGCTTGGTGACAAAGAGTATCATTTATATCGAGATGAGGACCTACTGGGCACGTTGCATGATTGA 339 0.4631 MSQRDSSHSSCFAYSMARRLAPLLNRVLVEKFVPPSKTNAGILLPEKSNTLNSAKVIAVGPGIHDKEGKLIPVCVKEGDTVLLPEYGGSEVKLGDKEYHLYRDEDLLGTLHD 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0995 112 Gene3D GroES chaperonin 13 112 IPR037124 GO:0006457
Lele15g0995 112 PRINTS 10kDa chaperonin signature 20 35 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 PRINTS 10kDa chaperonin signature 76 88 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 PRINTS 10kDa chaperonin signature 41 62 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 PRINTS 10kDa chaperonin signature 97 110 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 SUPERFAMILY GroES-like 18 111 IPR011032 -
Lele15g0995 112 FunFam 10 kDa chaperonin, mitochondrial 13 112 - -
Lele15g0995 112 Pfam Chaperonin 10 Kd subunit 20 109 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 SMART Cpn10_2 19 110 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 CDD cpn10 19 110 IPR020818 GO:0005524|GO:0006457|GO:0140662
Lele15g0995 112 PANTHER 10 KDA HEAT SHOCK PROTEIN 17 109 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0995 Lele-ChrLele15 5775870 5777087 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0995 18 111 Calmodulin-binding Proteins AT5G20720 38.542 4.12e-11 56.2