Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0983 ATGGCAGTACGGACATTGGAGAGCCGAAGCACAATGGAGAAAGAAATGAACGATGATCGTTCATCTGTGAGAAGTTGTAGCCGCAACATCACTGGTGGAGAAATCAGCAAATCATATGCTCGTCACCTACTCAATGCGGAAAAGCATTCTCCAACACCAAGAGCTTTGCGAGCTCTAAGAGGGCTGGTGAGATTGAGGACACTCATGGAAGGGCCAATTGTAAAACCTCAAGCCACTAGCACTCTTCGATCTATGCAAACTTTAGCTCGTGTGCAATCTCAGATTCGTTCTAGAATGATCAGGATGTTCGAGGAGAATCAGGTTCTGCAAAGGCAACTCCTACACAAGCATGCAAAAGAGCTCGAGAGCATGCGGATTGGAGAGGAATGGGATGGTAGCCTGCAGTCCAAAGAACAAATTGAAGCCAAGTTACTACAAAAGTATGAGGCAGCAATGAGAAGAGAAAAAGCGCTGGCTTATGCATTCACCCAAGCAGCTGCTAAAATTATGATGAAAAAAAAAAAGGGAAGGATGATCAACATTGCATCAGTTGTTGGTCTAGTTGGCAATGTTGGACAAGCCAATTATAGTGCAGCAAAGGCAGGAGTAATTGGTCTGACAAAAACTGTTGCAAGTGAATATGCAAGCAGAAACATCAATGTCAACGCTGTTGCCCCAGGGTTACTGCATTGA 693 0.4459 MAVRTLESRSTMEKEMNDDRSSVRSCSRNITGGEISKSYARHLLNAEKHSPTPRALRALRGLVRLRTLMEGPIVKPQATSTLRSMQTLARVQSQIRSRMIRMFEENQVLQRQLLHKHAKELESMRIGEEWDGSLQSKEQIEAKLLQKYEAAMRREKALAYAFTQAAAKIMMKKKKGRMINIASVVGLVGNVGQANYSAAKAGVIGLTKTVASEYASRNINVNAVAPGLLH 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0983 230 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 159 228 IPR036291 -
Lele15g0983 230 MobiDBLite consensus disorder prediction 1 28 - -
Lele15g0983 230 MobiDBLite consensus disorder prediction 8 22 - -
Lele15g0983 230 PRINTS Glucose/ribitol dehydrogenase family signature 170 186 IPR002347 -
Lele15g0983 230 PRINTS Glucose/ribitol dehydrogenase family signature 217 230 IPR002347 -
Lele15g0983 230 PRINTS Glucose/ribitol dehydrogenase family signature 196 215 IPR002347 -
Lele15g0983 230 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 183 211 IPR020904 GO:0016491
Lele15g0983 230 PANTHER IQ-DOMAIN 5-RELATED 54 165 - -
Lele15g0983 230 Gene3D - 107 230 - -
Lele15g0983 230 Pfam short chain dehydrogenase 159 228 IPR002347 -
Lele15g0983 230 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 176 184 IPR002347 -
Lele15g0983 230 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 215 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0983 Lele-ChrLele15 5728541 5729233 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0983 54 163 IQD Protein Family AT5G03040 66.364 1.46e-45 155