Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0978 ATGGGAGTGGCCGCGGAGTCCCAATTTCATGTTTTGGCCGTAGATGACAGCCTCATAGACCGGAAGCTGATTGAGAGGCTGCTCAAGACCTCCTCCTATCAAGGTTTGCTCATCTTAATGGACTCTGTTTCCTCAATAACAGTTACTACGGTGGATTCCGGTAGCAAGGCTCTGGAGTTCCTGGGCTTGCGCGACAGTGAACATATCGATCCCAGCACACCATCGGTTTCTCCTGGCAATCATCAGGAAGTGGAGGTGAATCTTATTATTACGGACTACTGTATGCCTGGCATGACAGGCTATGATTTACTCAAGAAAATCAAGGAATCTTCGTCTTTGAGAAACATACCGGTGGTGATTATGTCGTCGGAGAATGTACCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCAGAGGAGTTTTTTCTCAAGCCAGTGAGGCTCTCAGATTTGAATAAGCTTCGGCCCCATTTGATGAAGACGAAGTTGGAAGAACAAAAGCCTGCAAAACCAGAAATTCCTGAAAACCCACGAGTTCAACAAGAAAAACAAATTGACGTGCATCAATCCACATCACTGCCACAACTAGATCATCAACAACAACCACAATCGCCACAAGCGGCCAGTAATAACAAGAGAAAGGCCATAGAACAACAGGGGATTTCACCTGAGAATGACAGAACGAGACCTAGATACAGTGACATAGCCACAGCGGTGTGA 720 0.4625 MGVAAESQFHVLAVDDSLIDRKLIERLLKTSSYQGLLILMDSVSSITVTTVDSGSKALEFLGLRDSEHIDPSTPSVSPGNHQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLRPHLMKTKLEEQKPAKPEIPENPRVQQEKQIDVHQSTSLPQLDHQQQPQSPQAASNNKRKAIEQQGISPENDRTRPRYSDIATAV 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0978 239 CDD REC_typeA_ARR 11 154 - -
Lele15g0978 239 MobiDBLite consensus disorder prediction 161 239 - -
Lele15g0978 239 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 191 IPR045279 GO:0009736
Lele15g0978 239 MobiDBLite consensus disorder prediction 161 182 - -
Lele15g0978 239 ProSiteProfiles Response regulatory domain profile. 10 159 IPR001789 GO:0000160
Lele15g0978 239 Pfam Response regulator receiver domain 82 153 IPR001789 GO:0000160
Lele15g0978 239 SMART REC_2 9 155 IPR001789 GO:0000160
Lele15g0978 239 SUPERFAMILY CheY-like 8 160 IPR011006 -
Lele15g0978 239 MobiDBLite consensus disorder prediction 183 226 - -
Lele15g0978 239 Gene3D - 10 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0978 Lele-ChrLele15 5690907 5692368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0978 1 239 Response Regulator Gene Family AT3G57040 60.956 1.15e-93 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele15g0978 Response_reg 2.2e-15 CL0304