Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0950 ATGTTCACTGGCCTTGGAAAAGATGTCATAATTCTTCATGGCAAAGTGGAACTGCTGAATTCAAAGAGATGGAGTTGTGGTCTTGGGGGGGTCAAGCAGAAACAACATCCCCCACTTACAGAACCAAACAGAACACTAAGTGAAGCAAGAGAAGAACAGAGAAAGCATGCATTGACAGTGGCTATTGCAACAGCAGCAGCAGCTGAAGCTGCAGTTGCTGCTGCTCATTCTGCTGCTGAGGTTGTCAGGCTCACAGGTGCTTCTCGCTCCTATTCATATCTCTCCGAGGGCAACCGAAACTCGGCGGCTACTAAAATTCAAAGTGCATACCGTGGACATCTGGCCAGGAAAGCATTCAGAGCACTGAAGGGAATTATCAGACTGCAAGCTATAGTTCGCGGTCGAGCCATGAGACGTCAAATGGGTTTGCACTCCAGCGGAAGAAAGCAGGTAGGAATCCAGAAAAGCAACGGTCATGCTGCAGACAGAATCAACAGAAATGATAAGAGCAAGCAGCTTCCAAAGCAGAAAAAGAAGTTGGAAGATACGGAAATGAAGTTGCAGCTTGAATGTCATAGTCAAAGAACTTGGGATTGCGGCTTGCGCACAAAAGAAGACATGGAAGTTATATGGTTGAGAAAGCAAGAGGCTATTATTAAAAGAGAACGCATGAAGCAGTACTCTTTCTCACACCGGGAGAGAAAATTTTGCCACGTGGGGTTTGAATCATCAGTTCCCTCTAAGGAATTTAGAGGGGAGAGCTGCCGTACTCTAGGACAATGGCTGGACAGAGAAAAATGTGACGGAGATGTGTTTTATAAAGCAACAATTCCTTCAAACTTGACCGCTAGGGAATGCTATGATCATACAACACAAGTTGCAGAGAGCGAATTGACTTCAGTCACTTCTTCACAGCTTTCATTCCCAAGGAAGTCATTTTCCTGTGTGAAGAAAAGTTCAGTGGTAGATAACAGTTCCATGCCAAATTCTCCAGTTTTGCCAACATTCATGGGTGTGACAGAGAGAGCAAAGGCAAGGTCAATGAGCACTCCGAGACAAAGAACAGGATTTATGGAAATAAACTCAGATCGGACAGATTCTCAGAGTGAAGGCAGAACTTGTAGGTCTTGTTGTCATGAAACAAGTAGCAGCGCCAATGAAGAAAACGAAGTTTCTGCGCAGAGATGTCAGAGTGTCAACCGCCACTATTATCGTTAG 1218 0.4499 MFTGLGKDVIILHGKVELLNSKRWSCGLGGVKQKQHPPLTEPNRTLSEAREEQRKHALTVAIATAAAAEAAVAAAHSAAEVVRLTGASRSYSYLSEGNRNSAATKIQSAYRGHLARKAFRALKGIIRLQAIVRGRAMRRQMGLHSSGRKQVGIQKSNGHAADRINRNDKSKQLPKQKKKLEDTEMKLQLECHSQRTWDCGLRTKEDMEVIWLRKQEAIIKRERMKQYSFSHRERKFCHVGFESSVPSKEFRGESCRTLGQWLDREKCDGDVFYKATIPSNLTARECYDHTTQVAESELTSVTSSQLSFPRKSFSCVKKSSVVDNSSMPNSPVLPTFMGVTERAKARSMSTPRQRTGFMEINSDRTDSQSEGRTCRSCCHETSSSANEENEVSAQRCQSVNRHYYR 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0950 405 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Lele15g0950 405 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Lele15g0950 405 Gene3D - 98 146 - -
Lele15g0950 405 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Lele15g0950 405 PANTHER IQ-DOMAIN 5-RELATED 44 374 - -
Lele15g0950 405 SMART iq_5 98 120 IPR000048 GO:0005515
Lele15g0950 405 MobiDBLite consensus disorder prediction 142 179 - -
Lele15g0950 405 MobiDBLite consensus disorder prediction 161 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0950 Lele-ChrLele15 5534230 5536803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0950 44 359 IQD Protein Family AT5G03960 43.544 6.25e-45 158
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1476 13 24188671 24190608 Lele15g0950 15 5534230 5536803 hybridization
Lele14g1402 14 22569020 22571963 Lele15g0950 15 5534230 5536803 hybridization