Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0945 ATGGAAACCAAGCCCACAGAAATCAGCAGCTCGAAGATGTTTGGTGGTTACAACAAGAGGTTTAAACATTTTAGCCCTACCGTCGGCTGCTCCATGACTTTTTTCATTTACTTCCCACCTTCTCCTTCACCTTCTCACAAATTCCCTGTACTCTATTGGCTGTCCGGTCTCACTTGCTCAGATGAGAATTTTATAATTAAGTCTGGAGCTCAGCGTGCTGCTTCAAATGAGGGTATTGCTTTGATTGCCCCGGATACATCTCCAAGAGGCCTAAATGTGGAAGGAGAAGCTGACAGCTGGGACTTTGGTGTAGGTGCTGGATTTTATGTCAATGCCACACAAGAGAAGTGGAAGAATTGGCGCATGTATGACTATGTTGTCAAGGAACTGCCAGAGCTTTTAACTGATAATTTTCCACAGCTTGACACTTCAAATGCTTCTATATTTGGTCATTCTATGGGCGGACATGGTGCTTTAACAATCTACCTGAAAAATCTGAATAAATATAAGTCAGCTTCTGCCTTTGCACCCATTGCAAATCCTATAAATTGTGCTTGGGGACAGAAGGCATTTACAAATTATCTTGGCGGCAATAAATCTGAATGGGAGGATTATGATGCCACTTGTCTAATAAAGAAGTTCCATGACGTGCGTGGCCCCATCTTGATTGATCAGGGGGATGATGACAAGTTTTTGAAAGAGGATCAACTGCTTCCTCGCAAGTTTGAAGAGGCTTGCAGGAGTGCCAATGTGCCGCTGCTCTTGAGGTTTCAACCTGGTTACGATCACTCTTACTATTTTATTGCCACCTTCATAGATGATCACATCCGCCACCATGCTCAAGCTCTTAGGCTTCCCTAA 861 0.4367 METKPTEISSSKMFGGYNKRFKHFSPTVGCSMTFFIYFPPSPSPSHKFPVLYWLSGLTCSDENFIIKSGAQRAASNEGIALIAPDTSPRGLNVEGEADSWDFGVGAGFYVNATQEKWKNWRMYDYVVKELPELLTDNFPQLDTSNASIFGHSMGGHGALTIYLKNLNKYKSASAFAPIANPINCAWGQKAFTNYLGGNKSEWEDYDATCLIKKFHDVRGPILIDQGDDDKFLKEDQLLPRKFEEACRSANVPLLLRFQPGYDHSYYFIATFIDDHIRHHAQALRLP 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0945 286 Gene3D alpha/beta hydrolase 6 286 IPR029058 -
Lele15g0945 286 Pfam Putative esterase 25 277 IPR000801 -
Lele15g0945 286 FunFam S-formylglutathione hydrolase 5 285 - -
Lele15g0945 286 PANTHER S-FORMYLGLUTATHIONE HYDROLASE 5 284 IPR014186 GO:0018738|GO:0046294
Lele15g0945 286 SUPERFAMILY alpha/beta-Hydrolases 8 283 IPR029058 -
Lele15g0945 286 TIGRFAM fghA_ester_D: S-formylglutathione hydrolase 8 283 IPR014186 GO:0018738|GO:0046294
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0945 Lele-ChrLele15 5501217 5504290 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0945 1 285 Carbohydrate Esterase AT2G41530 78.947 1.08e-174 482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1483 13 24219211 24222295 Lele15g0945 15 5501217 5504290 hybridization
Lele14g1406 14 22601423 22607662 Lele15g0945 15 5501217 5504290 hybridization