Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0939 ATGTCTGTCCTTGTGCGTCTTCCTGATGGACGGGTACGAGCCTTCTGTAAAGGTGCATCAGAAATAATATTAAGAATGTGTGACCAAATTATTGATTCTAATGGAAATACAGTTGATCTTCCTGAAGATCGTGCAAAGAATGTCTCGGATGTGATAAATGGTTTTGCCTCTGAAGCTTTAAGAACTCTTTGTTTGGCTTTCGGAGATACAAATGACACCCAAAGGGAGGCTAGTATCCCTGATAATGGCTATACACTGATAGCCATTATAGGAATGAAGGATCCCGTGGGCCCTGGGGTTAAAGAAGCTGTTCAAACTTGTTTAGCAGCTGGAATAACTGTTCGTATGGTCCCTGGTGACAATATAAATACAGCTAGGGCTATAGCTAAAGAATGTGGTATACTTACTGAAGGTGGTGTTGCCATTGAAGGACCAGAATTTCGACACCTGTCTCCTGAGCAAATGAGGGATATCATACCAAGAATTCAGGTAATGGCACGATCCTTACCGCTTGACAAACATACCTTATTTACAATTTGCGGAACATACATTGGACTTGCCATGGGCATAGCTGGCACCGAGCTATTGAGCAGTATAACTTCAGTTTTTGGGGATCTGCATTGCGCTTTCCCTGGAAAGACATACATTAAGCCTTTCCAAGGACATTATTACCTTTTTAACTCTTCAAACCTTCAAAATCTTATTACCAGATTGCGATGATCTGCTCCTCTAACAGCTGTACAATCGCTTTGGGTCAACTTGATTACGCACACTCTGGGTGCATTAGCCCTGGCCATAGAACCTCCTAATGATGAGCTCATGAAAAGGCCTCCTGTTGGTAGAGGAGCAAGCTTTATCACCAAAGTCATGTGGAGAAATATCATTGGTCAAAGTATATATCAACTAATTGTCCTTGCAATTCTCAATTTTGACGGGAAGAACCTTCTGAGACTCAATGGTCCAGATGCAACTAGTGTCCTAAACACGATGATATTCAACTCCTTTGTCTTTTGCCAGGTTTTCAATGAGATCAACAGCCGAGACATAGAAAAGATAAATATATTGAGAAGCATGTTTGACAGTTGGATATTTTTAGCCGTGATTTTCTCCACAGTTGCATCTCAAGTGATTATTGAGTTCCTGGGAACATTTGCCAGTACTGTGCCTCTGAACTGGCAACTATGGGTACTGAGTGTGATAATTGGAGCAGTAAGCTTGCCCATAGGGGCTATCCTGAAGTGCATTCCAGTGGAAAAAGCTGCTCCAAAACACCACCACGATGGCTATATGACGCATTGCCTTCCGGTCCTGACATGGCTTAAACCCATCAATGGCGTATTCCGTTCTCTGGCCAAATGAAAATTGTCTTTAATTGCTCCGACTTCAATTCCTGGGGCGCTTTGCAGTCAGTACTCTATAATGCCGATCCATTTTTCTTCCACGCGGCAGCATTACAAGTACTGTATTGTTATGATAAAGCTTTCTGTATGTTCTCAGCAAGCATCCATTAGTTCACAGATATGTGAATACAGAATATTGAAGCACCTCAGCAATAATGGCAATTTACGAATTTTGCCTCGACAATAA 1587 0.4197 MSVLVRLPDGRVRAFCKGASEIILRMCDQIIDSNGNTVDLPEDRAKNVSDVINGFASEALRTLCLAFGDTNDTQREASIPDNGYTLIAIIGMKDPVGPGVKEAVQTCLAAGITVRMVPGDNINTARAIAKECGILTEGGVAIEGPEFRHLSPEQMRDIIPRIQVMARSLPLDKHTLFTICGTYIGLAMGIAGTELLSSITSVFGDLHCAFPGKTYIKPFQGHYYLFNSSNLQNLITRLRXSAPLTAVQSLWVNLITHTLGALALAIEPPNDELMKRPPVGRGASFITKVMWRNIIGQSIYQLIVLAILNFDGKNLLRLNGPDATSVLNTMIFNSFVFCQVFNEINSRDIEKINILRSMFDSWIFLAVIFSTVASQVIIEFLGTFASTVPLNWQLWVLSVIIGAVSLPIGAILKCIPVEKAAPKHHHDGYMTHCLPVLTWLKPINGVFRSLAKXKLSLIAPTSIPGALCSQYSIMPIHFSSTRQHYKYCIVMIKLSVCSQQASISSQICEYRILKHLSNNGNLRILPRQ 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0939 528 PANTHER CATION TRANSPORTING ATPASE 239 417 - -
Lele15g0939 528 Gene3D - 89 205 IPR023214 -
Lele15g0939 528 Gene3D - 229 422 - -
Lele15g0939 528 SUPERFAMILY HAD-like 81 182 IPR036412 -
Lele15g0939 528 Pfam haloacid dehalogenase-like hydrolase 61 163 - -
Lele15g0939 528 Pfam Cation transporting ATPase, C-terminus 242 414 IPR006068 -
Lele15g0939 528 Gene3D - 1 88 IPR023299 GO:0000166
Lele15g0939 528 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 1 100 IPR023299 GO:0000166
Lele15g0939 528 SUPERFAMILY Calcium ATPase, transmembrane domain M 240 417 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0939 Lele-ChrLele15 5480349 5482923 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0939 1 429 Primary Pumps ATPases AT2G41560 59.827 0.0 533