Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0930 ATGCTGATGGAGGGAGTGAAGAATAATAAAGAGTCGTTGGATCAGTCAAATGCGAGGAAGTCGAACCCGCCACCCTTCTTGTTAAAGACATACATGCTGGTGGAGGATCCGGCGACCGACAACGTCATATCGTGGAACGACGACGGCACGGCGTTTGTGGTGTGGCAGCCGGCGGAGTTTGCGCGTGACCTTCTTCCTACTCTCTTCAAGCACAGCAACTTCTCCAGCTTTGTTCGCCAGCTGAATACCTATGGATTTCGTAAAGCGGCAACGAACAGATGGGAATTTTGCAACAACAAGTTTAGGAAGGGGGAGAAAGAAAAACTGAGTGAGATTAGACGAAGAAAGGCGTTGGCGAACAGGCAGCAGCAGCAACAACAACCAGAAGGATCAACACAGGCAAATCATCAGGAATATTCGGAGGAAGAGCAAAGGTCTTCTTCAACCTCTTCGTCTTGTGGATATTCCAGTCTCGTGGATGAAAACAAGAGACTGAGGAGAGAGAACGGGGCATTGAGCTCTGAGCTGGCGGCCATGAAGAGGAAGTGCAGGGAGCTGCTGGAGCTAGTGGCTAAGCATGCCAAGAAAAATGAAGAAGAAGACGAGAGGCCTATGTTATTTGGAGTGAGGCTCGATGTGAACCAAGGACAGAGAGATTTGAAGACCAAGACAAACCCCAGTATTTTAATGCCCCAGTCATGCAAATAA 708 0.4887 MLMEGVKNNKESLDQSNARKSNPPPFLLKTYMLVEDPATDNVISWNDDGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKAATNRWEFCNNKFRKGEKEKLSEIRRRKALANRQQQQQQPEGSTQANHQEYSEEEQRSSSTSSSCGYSSLVDENKRLRRENGALSSELAAMKRKCRELLELVAKHAKKNEEEDERPMLFGVRLDVNQGQRDLKTKTNPSILMPQSCK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0930 235 SUPERFAMILY "Winged helix" DNA-binding domain 21 115 IPR036390 -
Lele15g0930 235 FunFam Heat stress transcription factor B-4 18 116 - -
Lele15g0930 235 Gene3D - 17 117 IPR036388 -
Lele15g0930 235 Coils Coil 155 196 - -
Lele15g0930 235 Pfam HSF-type DNA-binding 26 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0930 235 Coils Coil 102 122 - -
Lele15g0930 235 MobiDBLite consensus disorder prediction 116 156 - -
Lele15g0930 235 MobiDBLite consensus disorder prediction 119 135 - -
Lele15g0930 235 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 18 195 IPR027725 -
Lele15g0930 235 MobiDBLite consensus disorder prediction 1 22 - -
Lele15g0930 235 SMART hsfneu3 22 115 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0930 235 PRINTS Heat shock factor (HSF) domain signature 77 89 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0930 235 PRINTS Heat shock factor (HSF) domain signature 26 49 IPR000232 GO:0003700|GO:0006355|GO:0043565
Lele15g0930 235 PRINTS Heat shock factor (HSF) domain signature 64 76 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0930 Lele-ChrLele15 5435099 5436082 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0930 16 193 HSF AT2G41690 58.824 8.96e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Lele15g0930 HSF_DNA-bind 2e-31 CL0123