Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0929 ATGGCTTCTTCTTCCTATGATCCTCCCGCCAAGTCCGAGCTTGGCTCCGCCATGCCAGAGACTTCCGAAGCAGCCATCACCAACGATCAGGTGTTCTTATACAGGGATTTCAAGAAGGCGAAGAAAGAGAGAGGATGTACGGCCAAAGATCGAATCAGCAAAATGCCTCCTTGCGCAGCCGGTAAACGCAGCTCAATATATCGTGGTGTCACCAGGCATAGATGGACTGGTCGTTATGAGGCACATCTTTGGGATAAGAGCACGTGGAACCAAAATCAGAATAAGAAAGGAAAGCAAGGGGCATATGACGATGAAGAGGCTGCAGCTAGAGCCTATGACCTTGCAGCTCTAAAATATTGGGGTCCTGGCACTCTCATTAATTTTCCAGTGTCTGATTATACAAGAGATCTTGAAGAAATGCAGAATTTTTCAAGAGAAGAATACCTAGCATCTTTACGACGAAAGAGCAGTGGCTTTTCAAGAGGACTCTCAAAATATCGTGGACTCTCCAGTCAATGGGAACCATCATATGGTCGCATGGCTGGATCTGACTACTTCAATAGCATGCATTATGGTACAGGTGATGATTCAGCTGCAGAAAGTGAATATTTAAGTAGTTTCAGTGTAGACAGAAAGATTGATTTAACAAGTTACATCAAATGGTGGGGATCTGATAATAAGAGTGGTCGCCAAGCTGATGCTGGAACAAAATCATCATCAGAAGAAAAAAAGCGCACTTTTGGTGGAGATCATAGCAGTGAACTCAGAACATTGGAACAGCAAGAACAGCCTACTGAACCATATCAGATGCCACGGTTAGGCACGTCCCATGATGAAAAGAAGCATAAGAATACTTCAGTTTCTGCCTTAAGTATCTTGTCTCGATCAGCTGCTTACAAGAGCTTGCTAGAGACAGCATCAAAGAGAGAAGAAAATAGCAGTACTGACCCTAATGAAAATGACAACAAAAATAGCATCTGTAAGTTGGACCGTGGCAAGGCGGTGGAGAAATCATCGGATCATGGTGGCGGCGATGGAAGAACTGAACCTGTAATGGGGATGAGTGGGACTCTGTCTCTTCAAAAGAATGTTTACAACAACCCAGTGGCTCCATTCCTGTCTGCACCACTTTTGACTGCTTATAATGCTATGGATCCCTTAGTAGATCCTCTTCTCTGGACTTCTCTTGTTCCTATGCTTCCTGCTGGCCTTTCCCGTAATGCTCAGGTTACCAAGACTGAGGGCAGTTCATCTTATGCCGTGTTTCAGGCGGAGGAGTGA 1281 0.4489 MASSSYDPPAKSELGSAMPETSEAAITNDQVFLYRDFKKAKKERGCTAKDRISKMPPCAAGKRSSIYRGVTRHRWTGRYEAHLWDKSTWNQNQNKKGKQGAYDDEEAAARAYDLAALKYWGPGTLINFPVSDYTRDLEEMQNFSREEYLASLRRKSSGFSRGLSKYRGLSSQWEPSYGRMAGSDYFNSMHYGTGDDSAAESEYLSSFSVDRKIDLTSYIKWWGSDNKSGRQADAGTKSSSEEKKRTFGGDHSSELRTLEQQEQPTEPYQMPRLGTSHDEKKHKNTSVSALSILSRSAAYKSLLETASKREENSSTDPNENDNKNSICKLDRGKAVEKSSDHGGGDGRTEPVMGMSGTLSLQKNVYNNPVAPFLSAPLLTAYNAMDPLVDPLLWTSLVPMLPAGLSRNAQVTKTEGSSSYAVFQAEE 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0929 426 MobiDBLite consensus disorder prediction 226 287 - -
Lele15g0929 426 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 38 307 - -
Lele15g0929 426 SUPERFAMILY DNA-binding domain 65 131 IPR016177 GO:0003677
Lele15g0929 426 SMART rav1_2 66 135 IPR001471 GO:0003700|GO:0006355
Lele15g0929 426 Gene3D AP2/ERF domain 66 131 IPR036955 GO:0003700|GO:0006355
Lele15g0929 426 MobiDBLite consensus disorder prediction 236 257 - -
Lele15g0929 426 ProSiteProfiles AP2/ERF domain profile. 66 129 IPR001471 GO:0003700|GO:0006355
Lele15g0929 426 MobiDBLite consensus disorder prediction 1 22 - -
Lele15g0929 426 MobiDBLite consensus disorder prediction 305 354 - -
Lele15g0929 426 MobiDBLite consensus disorder prediction 305 344 - -
Lele15g0929 426 PRINTS Ethylene responsive element binding protein signature 111 131 IPR001471 GO:0003700|GO:0006355
Lele15g0929 426 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Lele15g0929 426 FunFam AP2-like ethylene-responsive transcription factor 65 131 - -
Lele15g0929 426 Pfam AP2 domain 66 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0929 Lele-ChrLele15 5429643 5432749 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0929 29 410 AP2-EREBP Transcription Factor Family AT2G41710 59.439 3.33e-146 422
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele15g0929 AP2 2.1e-09 CL0081