Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0915 ATGGCTCCAGCTTGTACGAGAAGCCGAGTCAAGGGGCTGCGGAGAAAGCAGAAAGAAATAATGGCGAGGCCTTGCGGTTCTAGTTTCGGTTCAACTTCAGCCACCCAAGATATAGTGAATACTACTGTAGAGAAGGATAACGAAGGAGATGCTTGTTCAATTGATTACTTGAAACTTGGTTCTGTTTGTCTTGGCTTCAATGGACATTATTGGCCAAATATGAGCGGCAATAAGCTGTATGCGACCTGTTGTCAAGCTCAGTGCCATGGCCTAGGTAATGAAGCCTTCTCTAGTGACATGGTAATGGAAGATGGTGAAACTAATGAAGAACATCAACAAACAAAACTTCCTGTTCCTAGCATGCCTTCAACAGCATGTGCTCCATACCCACATTCAGGTCCCAATTACGTAGGAGTGACCTCAAGTCATGGACCTCGGCCTCTGGTGCATCCTCATTGTGAGGGAGCTCATACCACCCAAATGGTCTTACCGCTGGAAATTGCAGAGGAGCCTGTTTACGTGAATGCCAAGCAATACCATGGAATTTTAAGGCGTAGGCGATTACGTGCTAAGGCTGAGCTGGAAAAGAAGCTAATAAAAGGAAGGAAGCCTTACCTTCACGAATCTCGACATTTGCATGCAATGAGAAGAGCCAGAGGATGTGGCGGCCGTTTCCTCAACACAAAGAAGCTTAATGATACAGCTTCTGCGAACACTAGAACCAACAACGAGGATGCTGCTACTTCTGACCTTAATGATACCCTTTCTCCGGACTCAAACTCAACTTCTGATAAAAACAACCACTGCTCACACGTTCAGGGATTTGATCTTGAAGGCGACTTCTCGGCACAGAAGGCTAAATCGCTCAATCACGCTGGGATTGGCAGAGTCCTCACCATTAATTAA 906 0.4603 MAPACTRSRVKGLRRKQKEIMARPCGSSFGSTSATQDIVNTTVEKDNEGDACSIDYLKLGSVCLGFNGHYWPNMSGNKLYATCCQAQCHGLGNEAFSSDMVMEDGETNEEHQQTKLPVPSMPSTACAPYPHSGPNYVGVTSSHGPRPLVHPHCEGAHTTQMVLPLEIAEEPVYVNAKQYHGILRRRRLRAKAELEKKLIKGRKPYLHESRHLHAMRRARGCGGRFLNTKKLNDTASANTRTNNEDAATSDLNDTLSPDSNSTSDKNNHCSHVQGFDLEGDFSAQKAKSLNHAGIGRVLTIN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0915 301 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 89 273 IPR001289 GO:0003700|GO:0006355
Lele15g0915 301 ProSitePatterns NF-YA/HAP2 subunit signature. 173 193 IPR018362 GO:0003677|GO:0016602
Lele15g0915 301 SMART cbf3 167 228 IPR001289 GO:0003700|GO:0006355
Lele15g0915 301 Gene3D - 168 229 - -
Lele15g0915 301 ProSiteProfiles NF-YA/HAP2 family profile. 168 228 IPR001289 GO:0003700|GO:0006355
Lele15g0915 301 PRINTS CCAAT-binding transcription factor subunit B signature 202 225 IPR001289 GO:0003700|GO:0006355
Lele15g0915 301 PRINTS CCAAT-binding transcription factor subunit B signature 171 193 IPR001289 GO:0003700|GO:0006355
Lele15g0915 301 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 170 225 IPR001289 GO:0003700|GO:0006355
Lele15g0915 301 MobiDBLite consensus disorder prediction 232 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0915 Lele-ChrLele15 5332671 5339799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0915 125 262 CCAAT-HAP2 Transcription Factor Family AT5G12840 49.640 8.12e-37 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YA Lele15g0915 CBFB_NFYA 1e-25 No_clan