Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0904 ATGGAGTCTCATGATGAGACAGGATGCCAGGCACCAGATCGCACTATTCTTTGTATCAACAATTGTGGCTTTTTTGGCAGAGCTGCTACCATGAATATGTGCTCCAAATGTTACAAGGACATGCTATTGAAGCAGGATCAGGCAAAACTTGCAGCATCATCAGTTGAAAACATTGTGAATGGCAGCTCTAGCAGCAGCAGTGGGAAAGAGGCTACGACTATGTGTTCTACTGATGTACAAATTGGAACTGTGGAGGTCAAGACAATACACACAGAAATTGGTCAGGATTCATCCTCTAGTGAGAGCTTAGAGATGAAAGTCAAGACTGGTCCCAGTAGATGTACGACTTGCCGGAAGCGTGTTGGGTTAACTGGTTTTAGCTGCAAATGTGGGAACATTTTCTGTGCATTGCATCGCTATTCCGACAAACACAATTGCCCTTTTGATTATCGGACAGTTGGTCAGGATGCTATAGTTAAAGCCAACCCTGTTGTTAAAGCAGAAAAGCTTGACAAAATCTAG 522 0.4349 MESHDETGCQAPDRTILCINNCGFFGRAATMNMCSKCYKDMLLKQDQAKLAASSVENIVNGSSSSSSGKEATTMCSTDVQIGTVEVKTIHTEIGQDSSSSESLEMKVKTGPSRCTTCRKRVGLTGFSCKCGNIFCALHRYSDKHNCPFDYRTVGQDAIVKANPVVKAEKLDKI 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0904 173 FunFam Zinc finger AN1-type containing 6 87 169 - -
Lele15g0904 173 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Lele15g0904 173 Gene3D - 1 76 - -
Lele15g0904 173 Pfam AN1-like Zinc finger 114 150 IPR000058 GO:0008270
Lele15g0904 173 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 55 - -
Lele15g0904 173 SUPERFAMILY AN1-like Zinc finger 104 168 IPR035896 -
Lele15g0904 173 SMART AN1_Zf_4 114 151 IPR000058 GO:0008270
Lele15g0904 173 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Lele15g0904 173 PANTHER AN1-TYPE ZINC FINGER PROTEIN 16 173 - -
Lele15g0904 173 ProSiteProfiles Zinc finger AN1-type profile. 108 154 IPR000058 GO:0008270
Lele15g0904 173 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Lele15g0904 173 Gene3D - 87 169 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0904 Lele-ChrLele15 5251856 5252377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0904 5 173 C2H2 Transcription Factor Family AT3G52800 42.690 9.81e-41 133