Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0903 ATGGCTACGCTCTGTACATACCTGTTCCTTCTCTCTGTGACCCTCTCAACCTTCAATCTTGGTTCTTCATCTTCTTCGTCAGAGGCGGATATCCTTCTCTCCTTCAAGGCCTCCATTGAAGACTCTAGGAAGGCTCTGTCAAGCTGGTCCAATACTTCTTCCACTCACTACTGTAACTGGACTGGAATCGCCTGCTCCACCGCCTCTCCTCTCTCTCTCACTTCCATTAACCTTCAGAACTTGAACCTTTCTGGGGACCTCTCATCTTCGATATGTGATCTCCCAAATCTGTCATACCTCAATCTTGCTGATAATATATTCAACCAGCCCATCCCTCTTCATCTTTCTCAGTGTATTTCGTTAGAGACTTTGAATCTCAGTAATAATCTCATATGGGGAACCATCCCAATGCAGATTTCTCAGTTTGGTTCATTGAGAGTGCTCGATTTCAGCAGAAATCACATAGAAGGAGATATCCCAGAAAGCTTGGGCTCCCTCAAGAACCTCGAGGTCCTTAGCATGGGAAGTAACCTACTATCAGGTGATGTACCAGCTATCTTCATGAATTTAACCAGGCTTGCCGTTCTTGACTTGTCTGAAAATCCATACTTGGAAAGTGAGATTCCTGAGGACATAGGCGAACTTGGGAGTCTCAAGCAACTTCTATTGCAAAGTTCTGGTTTTCACGGTGAAATTCCGGATTCTTTTGCGAACCTGCGTAGCTTGACTCATTTAGACCTCTCTCAGAACAATCTAACCGGTGAGATTCCTCAGGGTCTGGTGTCTTCTCTCAAGAACCTGGTGTCTTTTGATGTTTCACAGAACAAGCTTTCGGGGTCATTTCCAAATGGCATTTGTAATGCAAAAGGTCTCATAAATCTCAGTCTCCATACAAATATTTTCGGTGGTCCAATAGCCAACACCATTGGTGAATGTAAGAATCTTGAGAGATTTCAAGTTCAGAACAACGAGTTAACTGGAAACTTCCCTTATTCATTATGGTCATTACGTAAAGTTAAGCTCGTTAGAGCTGAAAACAACAGATTCTCAGGACAGATACCTGAATCCATATCGGGAGCTGTTCAGTTGGAGCAAGTTCAGCTTGACAATAACAGCTTTGCCGGGAAAATTCCTCAGAGTCTTGGGCTGGTCAAGAGCTTATACAGATTCTCTGCGTCTCTCAATCGTTTCTATGGAGAACTTCCTGTAAACTTTTGTGATTCCCCTGTTATGAGTATTGTGAATCTCTCTCACAATTCCCTTTCTGGTCAAATCCCAGAGCTGAAAAAATGCAGGAAGCTTGTTTCATTGTCTTTAGCAGACAATAGTCTCACCGGACAAATCCCTCCCTCCCTTGCTGAGTTGCCAGTGCTAACTTATCTTGATCTTTCAGCTAACAATCTCACTGGTTCAATCCCACTAGGACTTCAAAATTTAAAGCTTGCTCTTTTCAATGTGTCCTTCAATCAGCTATCTGGTAAGGTACCTTACTCCTTGATTTCTGGTCTCCCTGCCTCATTTTTGGAAGGAAACCCTGAACTTTGTGGCCCTGGATTACCCACTTCCTGCTCTGATGACCCTCAAAGACACCATTCCGGGGGTCTCACTGCCCTAGCATGTGCTCTTATCTCTGTAGCTTTCGTTATAGGAACTGCGATGTTTGTTGGTGGATTTATTTTGTATAGGAAGTCTAGCAAGAGGAATCAAATAGGAGTTTGGCGCTCAGTGTTCTTCTATCCTCTTAGAATTACTGAGCAAGATCTGCTTATAGGAATGGATGAGAAAAGCTTGATTGGAAATGGTGGGGTGTTTGGCAAAGTTTATGTTGTGAGTTTACCCAGCGGTGAACAAGTGGCTGTAAAGAAGCTAGTGAATTTTGGGAACCAGACGTCAAAAAGTCTGAAAGCTGAGGTCAAGACATTGGCTAAGATTAGGCATAAGAATGTTGTAAAAATCCTGGGGTTTTGCCATTCTGATGAGTCAATCTTTCTCATTTATGAGTACTTGCAAGAAGGAAGCTTAGGGGACTTGATTTCCCGTGAGGATTTTGAGTTGGAGTGGGAGGCAAGATTGAGGATTGCCATCAGGGTCGCTCAAGCGCTGGCCTATCTTCACAATGACTATGTTCCTCACTTGCTTCACAGAAACGTCAAGTCCAGGAACATTCTTCTGGATGCAAACTTTGAGCCAAAACTCACAGATTTTGCACTTGATCGAATTGTGGGAGAAGCCGCATTTCAGTCAACTGTTGCTTCTGAAGCAGCATCTTCCTGCTATAATGCTCCAGAATATGGGTACAGTAAGAAAGCAACTGAAGAATTGGACATATACAGCTATGGTGTTATATTGCTAGAGCTTGTGACTGGGAAGCAAGCAGAGCAAGCAGTATCAACAGAGTCTCTTGACATAGTGAAGTGGGTTCGAAGGAGAGTGAACATCACTGATGGGGTGCATCAAGTACTTGATCCCAAAATATCACATTCCAATCAGCAAGAAATGATTGGAGCCCTGGAAACCGCTCTTCGTTGCACTTCCGTGGTGCCAGGAAAAAGACCATCGATGGTTGAAGTTGTACGAGCTCTTCAGTCCCTTGAGTCACAAACCATCGCTGCAAATTCTCAGGATTCGAATGAGGAACCCTCGATTCCAATATGA 2655 0.4369 MATLCTYLFLLSVTLSTFNLGSSSSSSEADILLSFKASIEDSRKALSSWSNTSSTHYCNWTGIACSTASPLSLTSINLQNLNLSGDLSSSICDLPNLSYLNLADNIFNQPIPLHLSQCISLETLNLSNNLIWGTIPMQISQFGSLRVLDFSRNHIEGDIPESLGSLKNLEVLSMGSNLLSGDVPAIFMNLTRLAVLDLSENPYLESEIPEDIGELGSLKQLLLQSSGFHGEIPDSFANLRSLTHLDLSQNNLTGEIPQGLVSSLKNLVSFDVSQNKLSGSFPNGICNAKGLINLSLHTNIFGGPIANTIGECKNLERFQVQNNELTGNFPYSLWSLRKVKLVRAENNRFSGQIPESISGAVQLEQVQLDNNSFAGKIPQSLGLVKSLYRFSASLNRFYGELPVNFCDSPVMSIVNLSHNSLSGQIPELKKCRKLVSLSLADNSLTGQIPPSLAELPVLTYLDLSANNLTGSIPLGLQNLKLALFNVSFNQLSGKVPYSLISGLPASFLEGNPELCGPGLPTSCSDDPQRHHSGGLTALACALISVAFVIGTAMFVGGFILYRKSSKRNQIGVWRSVFFYPLRITEQDLLIGMDEKSLIGNGGVFGKVYVVSLPSGEQVAVKKLVNFGNQTSKSLKAEVKTLAKIRHKNVVKILGFCHSDESIFLIYEYLQEGSLGDLISREDFELEWEARLRIAIRVAQALAYLHNDYVPHLLHRNVKSRNILLDANFEPKLTDFALDRIVGEAAFQSTVASEAASSCYNAPEYGYSKKATEELDIYSYGVILLELVTGKQAEQAVSTESLDIVKWVRRRVNITDGVHQVLDPKISHSNQQEMIGALETALRCTSVVPGKRPSMVEVVRALQSLESQTIAANSQDSNEEPSIPI 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0903 884 Gene3D Transferase(Phosphotransferase) domain 1 669 882 - -
Lele15g0903 884 SUPERFAMILY L domain-like 305 402 - -
Lele15g0903 884 Gene3D Ribonuclease Inhibitor 262 526 IPR032675 -
Lele15g0903 884 Gene3D Ribonuclease Inhibitor 70 261 IPR032675 -
Lele15g0903 884 Pfam Leucine rich repeat 144 202 IPR001611 GO:0005515
Lele15g0903 884 Pfam Leucine rich repeat 217 277 IPR001611 GO:0005515
Lele15g0903 884 SUPERFAMILY Protein kinase-like (PK-like) 595 861 IPR011009 -
Lele15g0903 884 FunFam - 587 668 - -
Lele15g0903 884 FunFam Leucine-rich repeat family protein 27 184 - -
Lele15g0903 884 FunFam Probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 262 526 - -
Lele15g0903 884 Pfam Protein kinase domain 594 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0903 884 SUPERFAMILY RNI-like 75 504 - -
Lele15g0903 884 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 669 869 - -
Lele15g0903 884 SMART LRR_typ_2 190 215 IPR003591 -
Lele15g0903 884 SMART LRR_typ_2 142 166 IPR003591 -
Lele15g0903 884 SMART LRR_typ_2 94 118 IPR003591 -
Lele15g0903 884 SMART LRR_typ_2 455 478 IPR003591 -
Lele15g0903 884 SMART LRR_typ_2 239 263 IPR003591 -
Lele15g0903 884 SMART LRR_typ_2 264 288 IPR003591 -
Lele15g0903 884 Pfam Leucine rich repeat N-terminal domain 26 66 IPR013210 -
Lele15g0903 884 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 9 863 - -
Lele15g0903 884 Gene3D Ribonuclease Inhibitor 21 69 IPR032675 -
Lele15g0903 884 PRINTS Leucine-rich repeat signature 242 255 - -
Lele15g0903 884 PRINTS Leucine-rich repeat signature 455 468 - -
Lele15g0903 884 ProSiteProfiles Protein kinase domain profile. 593 864 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele15g0903 884 Gene3D Phosphorylase Kinase; domain 1 586 668 - -
Lele15g0903 884 ProSiteProfiles Leucine-rich repeat profile. 77 98 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0903 Lele-ChrLele15 5243408 5246187 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0903 32 864 Receptor kinase-like Gene Family AT5G06940 63.962 0.0 1053
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele15g0903 Pkinase 4.4e-39 CL0016