Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0897 ATGGATTTGAATTCGCATCAGAATTATCAGCCCCAGAAGCATCAATCCAATTCAGGATTGACTCGCTTTCGCTCTGCGCCCAGTTCGCTTCTCGCTAATTTCAGACAAGCTGCTGAATCTGTTAAATCCGAGAGACGAATTTCGAGATTCGCAAACAGCAGTAATAGCAACGATACGGCGTCGCCGAGCTTTCAAGAATTCGAATCCGAACACAAACCCCCTGAATATCCATCGGAGGCTGCTCTGAACGGCATGAATTCCCAGCAAGGCCATAGTGGCGGCGGCCTACCACCTCACTATCCAAGGCATAGTTCTTCTTATAGTTCATCCATGGATAGCTCCTTTGGACTGATGGGTTCAACGGGAATGGATCACGAAACTCAGCCAAAAAGCTTTGCTTCGTCTCTTCTTAGGCAAAGTAGCTCCCCTGCCGGTCTTTTCTCCAACATCCCATTTCCTAATGGGTATGGCACCATTAAAGAGGTAAGAAACTATGGTGCGGTGAACGGCAGTAGTATAGGTGGACTTACTCCATCTATCAACGGATGGAAGAATCAGATTAACTTCTCATCAAGAAGTATCTCCCTGGGAGCCCTGTCCCAGATCTCTGAAATAGAATGTGAAGGTATTGGAGCAACGAGCCCAGATGATGGTAGGGTGGGAACTAATAATAGTGGTGATACTCGGTATTATGGTCCTGGCTTCCCTTATGCCTCCTGGAATGATACCTCACATGTCTCAGAAAATCTCAATGGTTTTAAAAGAGATCAAACTAGTAATGAAAAGTTGTATTCTGATGCTCAGAATATTGAGCCTGGAAGTCGGGTTAGTGTATTATCGCATCACTTGAGTTTGCCAAAAACCCCATCACATGCGGCTGGAGTGGAGAAGTTTCTTCAATTCCCAGATTCTGTTCCTTGTAAAATAAGAGCAAAGCGGGGCTGTGCCACTCATCCACGAAGCATAGCCGAAAGGGTTAGGAGAACTCGTATCAGTGAACGGATGAAGAAGTTACAGGATCTTGTCCCAAACATGGACAAGCAAACAAACACAGCAGACATGTTGGACTTGGCTGTGGGGTATATTAAAGATCTTCAGAAACAATTCAAGACTCTGAGTGAGAAACGGGCCAACTGCAGGTGTACGAGTATGAAGAAAGCAGAAGCAAATTAA 1173 0.4535 MDLNSHQNYQPQKHQSNSGLTRFRSAPSSLLANFRQAAESVKSERRISRFANSSNSNDTASPSFQEFESEHKPPEYPSEAALNGMNSQQGHSGGGLPPHYPRHSSSYSSSMDSSFGLMGSTGMDHETQPKSFASSLLRQSSSPAGLFSNIPFPNGYGTIKEVRNYGAVNGSSIGGLTPSINGWKNQINFSSRSISLGALSQISEIECEGIGATSPDDGRVGTNNSGDTRYYGPGFPYASWNDTSHVSENLNGFKRDQTSNEKLYSDAQNIEPGSRVSVLSHHLSLPKTPSHAAGVEKFLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMKKLQDLVPNMDKQTNTADMLDLAVGYIKDLQKQFKTLSEKRANCRCTSMKKAEAN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0897 390 Gene3D - 316 388 IPR036638 GO:0046983
Lele15g0897 390 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 383 - -
Lele15g0897 390 Coils Coil 362 382 - -
Lele15g0897 390 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 318 381 IPR036638 GO:0046983
Lele15g0897 390 MobiDBLite consensus disorder prediction 102 137 - -
Lele15g0897 390 FunFam Transcription factor bHLH130 family 316 385 - -
Lele15g0897 390 Pfam Helix-loop-helix DNA-binding domain 320 366 IPR011598 GO:0046983
Lele15g0897 390 MobiDBLite consensus disorder prediction 1 137 - -
Lele15g0897 390 MobiDBLite consensus disorder prediction 1 36 - -
Lele15g0897 390 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 315 365 IPR011598 GO:0046983
Lele15g0897 390 SMART finulus 321 371 IPR011598 GO:0046983
Lele15g0897 390 MobiDBLite consensus disorder prediction 47 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0897 Lele-ChrLele15 5198550 5201335 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0897 1 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 48.052 7.32e-90 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele15g0897 HLH 2.1e-09 No_clan