Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0882 ATGATCCACTTGCGAAAGCTTAGATTGAAATTCACTCTCCAACGCCCTCCTCTTCCTTTCTTTCTTAGGTCGTCAGAGAACCCAGTTGGGTCTATTGCTCAAAACCCTAGACTATACAGAACCGCAAGAGTGACTGCCCATTGTGAAGATCTTGAAGCGGCTCTGACTGCCGTCGGTCTCACCATTAAGCAGGCCCTAAAAGAAGCGAAAGTTGCATTGCTGGAGTATCTGCATTCTACTAGAAGCATCCAGTACTTGGATGCGGATAATATGAGTAGAAACTGCCCCTACTTTCTTGAGGGGCTTCTGAAGAATGTAGGCGTCGCGGGGAACATCGGGCGATCAGTTTCCAGGTACTTGCGTTATCATCCCATCAATGAATTTGAGCCCTTCTTTGAAAGCATCGGTTTAAAACCTTCTGAATATGCATCTATATTACCGAAAAATATGATTTTTTTGAGCGATGACCAACGGTTGCTGGGGAACTATTGCGCTCTTTGTAACTATGGGATTCCTCGTAATAAGATGGGAAAGATATATATGGAAGCAACTGAAGCGTTTCGGTATGATTATGGGGTTTTAACATCAAAGCTTCGAGCTTATGAAGGATTGGGTCTTGGCCCGTCTACTCTGCTAAAAGTTATTGCTTCTAGCCCATATCTTCTGATTGGAGATTGTAACCCTGATTTTGTCAAGGTTATAGAGAAGTTTAGGCATTATGTTAAGGATATTAATTGGATTGAGGGACATTTATTGGATGAGACTTCTTGTAATTGGAGCCAGATGCTTAGGCTCTTGTGCTTTTTTGACAGTGTTTGGACTGAGCAACGGTTATCTGACATGATCAACCAGCACCCTGACTTTCTCTTTGAGGGATCGGGAGGTAGTAGTACACTATCCCTTATAGGCTTCCTGCTAAAATTTGGATTGTCAGTGGATCAAATATCCTTCATATTTGAAAAATTTCCACCGATAAAAGTGAGCAAATTCCTTTCAAATTTGAGGCATTGTTTTCTATTCTTGAGTGAACTTGAAATGGAGGCTGCGGAGATTGGGAGGATTTTTCGTTCTCACTCCTTAATGTTGGGTTCATTTACCTTGAAGAAAACCAATAGTTTACTTTCTAACTTGAATATTGGGAAGAAGCGACTTCGGATGATCATACAGGATAATCCGCAAGAACTGAAGAATTGGGAATTGGGAAGAAGAGTCAAGGCTTTGCCAGGCACCGACGAAGAGAAAATATCCCGGTTGCGAAAGACAGAGTTCTTGTTGAGCTTGGGATTTGTTGAGGACTCTAAAGAGATGAAAGGAGCATTTAAGGTGTTTAGAGGTAAGGGAGCAGAACTCCAAGAGAGGTTCAACTTTATTGTTCAAGCTGGCTTGGATCCTAAAGACGTGAAGGAAATGGTTAAAGTTTACCCTCAGATTCTTAACCTCAGAACAGATGCAATCGGCCAGAAAATTGACTATCTTGTAAATGAACTAGGATATCCCATATCATCTTTATTGAACTGGCCATCTTTTCTTTCCTACAGAACTGAAAGAGTCAAGCTTAGGTTCTCATTCTATAAGTGGCTTGTCGACCAGGGATGTGCTGATCCCAATCTTTCTTTGAGCACTGTAGTTTCATGCACAGTGAACATATTCGTGCAAACGTATGTAAATCGCCATCCAAGTGGCCCTCAAGTTTGGCGGGATTTGAATGATAAAATTTGTTGTCAGGACTAA 1731 0.4165 MIHLRKLRLKFTLQRPPLPFFLRSSENPVGSIAQNPRLYRTARVTAHCEDLEAALTAVGLTIKQALKEAKVALLEYLHSTRSIQYLDADNMSRNCPYFLEGLLKNVGVAGNIGRSVSRYLRYHPINEFEPFFESIGLKPSEYASILPKNMIFLSDDQRLLGNYCALCNYGIPRNKMGKIYMEATEAFRYDYGVLTSKLRAYEGLGLGPSTLLKVIASSPYLLIGDCNPDFVKVIEKFRHYVKDINWIEGHLLDETSCNWSQMLRLLCFFDSVWTEQRLSDMINQHPDFLFEGSGGSSTLSLIGFLLKFGLSVDQISFIFEKFPPIKVSKFLSNLRHCFLFLSELEMEAAEIGRIFRSHSLMLGSFTLKKTNSLLSNLNIGKKRLRMIIQDNPQELKNWELGRRVKALPGTDEEKISRLRKTEFLLSLGFVEDSKEMKGAFKVFRGKGAELQERFNFIVQAGLDPKDVKEMVKVYPQILNLRTDAIGQKIDYLVNELGYPISSLLNWPSFLSYRTERVKLRFSFYKWLVDQGCADPNLSLSTVVSCTVNIFVQTYVNRHPSGPQVWRDLNDKICCQD 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0882 576 FunFam Transcription termination factor MTEF18, mitochondrial 301 568 - -
Lele15g0882 576 PANTHER CGI-12 PROTEIN-RELATED 277 558 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 Pfam mTERF 437 548 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 Pfam mTERF 274 429 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 Gene3D Transcription termination factor 3, mitochondrial 296 566 IPR038538 -
Lele15g0882 576 Gene3D Transcription termination factor 3, mitochondrial 123 294 IPR038538 -
Lele15g0882 576 SMART mt_12 177 207 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 SMART mt_12 316 347 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 SMART mt_12 398 430 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 SMART mt_12 279 311 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 SMART mt_12 500 531 IPR003690 GO:0003690|GO:0006355
Lele15g0882 576 SMART mt_12 468 499 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0882 Lele-ChrLele15 5122395 5124125 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lele15g0882 mTERF 4.6e-07 No_clan