Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0873 ATGGCCATGTCGAACAGGCCTTCCCTATCATCCATCAACAAGAATTCGCAGGAGATAGCGAAAACGAGGCCCAAGATACGCATCATTCACATATTTGCACCGGAGATCATCGAGACTGATGTTGGAAACTTCCGAGAACTTGTGCAGAGGTTAACCGGAAAAACATCTGCTGAGAAACATGCCCAAAAGGTGCCGACAACAGCAGTAAGACGTCAACATACAACCAGATCGCTTGTCGGCCTCACCTCCGATAAGCCTAAGGGGCTGGACTATTTTCAGTCAGCAGGCGAGAGACTGGTCATGAAGGAAGAAGAAGAAGTTGGACTTTCCGGGGAAGAAAAGTCTGCAGGTGGCTACTTGGGTGGGTTCTCAGATTTGGAAGGCTTTGTTTCAGAGTTTGCTCAAATTCCCTTGCTTCCTTTGGATGATACTCACATTCAAGGCTATGAACAACTTCAACTTATTTTGTCTTCAGGTCTTTATGTTCCTTGCCTCTCATTGCAGGATGAAGTGTTTGAAATTCAGAAAGAAACGTATAGGGGGCAGCAATACAGTCAGAGATCCAAAACGCCACTTGTCAAGCCTCATAACTTCATGCACCCAGATGATCACCTAGTTTTGGAAGACGACAGTGGGAGAGTTAAGCTCAGTGGGGATATCATTTCACCTTCTGTGTATATAACAGGGATCGTAGTTGCTATACATGGAAAAGAAACTGGGGCTGGTGATTTTTTGGTTCTAGATGTCCTCGAAGCAGGCCTACCACCACAAATAGATCTTCCTCTTAAATCAAGGGAAGACAAATATGTTGTTTTTGTGTCCGGGTTAAGTGTTGGGAGCAGCAACTCCAATCCTCTCCAATTTCAGCTCTTCATTGATCATATTACTGGTCATTTAGGAGATGAGAAGGAGCAAATTTTGGCATCTCAAATCGCTCATGTTGTCATATCTGGGAATTCTATTGAGTTCCCTCGTGAACTTCTTAATGGGCAGAATTTGTCTGCAAAGGATCTCTCAAGGTTGTCTGAACCAATAAAGGAACTTGATATTCTGTTGAATCAGATCGCTGTAGGTTTGCCTTTGGATATCATGCCAGGACCCAGAGACCCAGCTAACTACTCATTACCACAGCAGCCTCTGCACAGATGCCTTTTCCCTGGGTCATCTGCTTATAACACTTTTAGATCCTGCACAAATCCTCACTGCTTTGAGCTTGATAATATTCGATTTCTCGGGACATCTGGTCAAAATATAGATGATCTTGATAAGTATTCAGAGGCCACAGATAAACTTGAATTCATGGAAAGGACTTTACGTTGGAGACATTTGGCACCAACAGCACCTAATACCCTTGGGTGCTATCCTTTCACTGATAGGGATCCTTTCTTCCTTGAGAGCTGTCCCCATGTGTATTTTGTTGGCAATCAAGATAAATATGAAACTCGTGTGATTAAGGGATCAGAAGGGCAGTTGGTGAGACTCATCTGCGTTCCTAAATTCAATGAGACTGGAGTTGCTGTTATGCTGGAACTTTTGCAGGCCAGCAACTACAGTGTACATGTTATGGTAAGTCTGTGGCAGCACCACTTTAGTGGAAAGGAGGTCGCTTCTGCCGACACGGAGGCCGGCCATGATCCGGCAACTCAGAATTGGGAGGGCACAGCTCAGGCCGAGGGATATAGGAACAAGTTTCTCTTGGCAATCATTGAAAAGGTGAGTTTCATTCACCTTCTTAAAAAAGCTATACTCTTACTCTTGTTGATAAGCAATGCGACTGAGCGAGATGTCCAAAAATGGTATCTGCTAACTGTCATTAGAAAGCCTAGGTATAAATGCATAATTGAGATGGGTAACACTTCATTGTGGAGTCAGTGTGGCGTAGAACCATAG 1890 0.4413 MAMSNRPSLSSINKNSQEIAKTRPKIRIIHIFAPEIIETDVGNFRELVQRLTGKTSAEKHAQKVPTTAVRRQHTTRSLVGLTSDKPKGLDYFQSAGERLVMKEEEEVGLSGEEKSAGGYLGGFSDLEGFVSEFAQIPLLPLDDTHIQGYEQLQLILSSGLYVPCLSLQDEVFEIQKETYRGQQYSQRSKTPLVKPHNFMHPDDHLVLEDDSGRVKLSGDIISPSVYITGIVVAIHGKETGAGDFLVLDVLEAGLPPQIDLPLKSREDKYVVFVSGLSVGSSNSNPLQFQLFIDHITGHLGDEKEQILASQIAHVVISGNSIEFPRELLNGQNLSAKDLSRLSEPIKELDILLNQIAVGLPLDIMPGPRDPANYSLPQQPLHRCLFPGSSAYNTFRSCTNPHCFELDNIRFLGTSGQNIDDLDKYSEATDKLEFMERTLRWRHLAPTAPNTLGCYPFTDRDPFFLESCPHVYFVGNQDKYETRVIKGSEGQLVRLICVPKFNETGVAVMLELLQASNYSVHVMVSLWQHHFSGKEVASADTEAGHDPATQNWEGTAQAEGYRNKFLLAIIEKVSFIHLLKKAILLLLLISNATERDVQKWYLLTVIRKPRYKCIIEMGNTSLWSQCGVEP 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0873 629 Gene3D - 261 526 - -
Lele15g0873 629 FunFam DNA polymerase delta small subunit 255 527 - -
Lele15g0873 629 PANTHER DNA POLYMERASE DELTA SUBUNIT 2 185 513 IPR024826 -
Lele15g0873 629 Pfam DNA polymerase delta subunit OB-fold domain 183 249 IPR040663 -
Lele15g0873 629 CDD MPP_PolD2_C 269 511 IPR041863 -
Lele15g0873 629 Pfam DNA polymerase alpha/epsilon subunit B 270 479 IPR007185 GO:0003677|GO:0006260
Lele15g0873 629 Pfam VQ motif 31 57 IPR008889 -
Lele15g0873 629 Gene3D - 166 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0873 Lele-ChrLele15 5048176 5057305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0873 183 511 Core DNA Replication Machinery Family AT2G42120 75.758 0.0 548